DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fkbp39 and Fkbp1a

DIOPT Version :10

Sequence 1:NP_524364.2 Gene:Fkbp39 / 41860 FlyBaseID:FBgn0013269 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_037234.2 Gene:Fkbp1a / 25639 RGDID:2617 Length:108 Species:Rattus norvegicus


Alignment Length:103 Identity:46/103 - (44%)
Similarity:60/103 - (58%) Gaps:1/103 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 GVKIVDQVVGKGEE-AKQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFALGGGEVIKGWDVGVAG 315
            ||::.....|.|.. .|:|:...|:|.|.|:...|...|..:.|||||.||..|||:||:.|||.
  Rat     2 GVQVETISSGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFTLGKQEVIRGWEEGVAQ 66

  Fly   316 MKVGGKRVITCPPHMAYGARGAPPKIGPNSTLVFEVEL 353
            |.||.:..:...|..||||.|.|..|.|::||||:|||
  Rat    67 MSVGQRAKLIISPDYAYGATGHPGIIPPHATLVFDVEL 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fkbp39NP_524364.2 NPL 4..86 CDD:465511
FkpA 253..356 CDD:440311 45/102 (44%)
Fkbp1aNP_037234.2 FkpA 3..106 CDD:440311 45/102 (44%)
Blue background indicates that the domain is not in the aligned region.

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