DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fkbp39 and fkb-1

DIOPT Version :9

Sequence 1:NP_524364.2 Gene:Fkbp39 / 41860 FlyBaseID:FBgn0013269 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001255531.1 Gene:fkb-1 / 191634 WormBaseID:WBGene00001426 Length:139 Species:Caenorhabditis elegans


Alignment Length:93 Identity:41/93 - (44%)
Similarity:60/93 - (64%) Gaps:0/93 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 EEAKQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFALGGGEVIKGWDVGVAGMKVGGKRVITCPP 328
            :::::|.::.::|.|.|....:...|..:.:.|.|.||.|.||||||.|:..|.||.:|::|.||
 Worm    40 QKSRKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPP 104

  Fly   329 HMAYGARGAPPKIGPNSTLVFEVELKAV 356
            |:.||.|||||||..||.|.|:|||..:
 Worm   105 HLGYGERGAPPKIPGNSVLKFDVELMKI 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fkbp39NP_524364.2 FKBP_C 262..354 CDD:278674 40/89 (45%)
fkb-1NP_001255531.1 FKBP_C 38..129 CDD:278674 39/88 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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