DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6236 and CG9988

DIOPT Version :9

Sequence 1:NP_650446.2 Gene:CG6236 / 41857 FlyBaseID:FBgn0038318 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_651625.1 Gene:CG9988 / 43388 FlyBaseID:FBgn0039591 Length:668 Species:Drosophila melanogaster


Alignment Length:735 Identity:181/735 - (24%)
Similarity:298/735 - (40%) Gaps:155/735 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CCCVVVLLVTWYVLNVE--------------------RDLDKSLKIEIIERSIRSA--VNRGECR 57
            |.|::.::|   :|.::                    .|:..:.:...::..:|.|  |...:|:
  Fly    13 CFCLIAIIV---ILGIKTQNANTKPRVSEVTGSDDTNSDIPPAEEDRNVQDVVRPAYFVESAKCK 74

  Fly    58 HPHLPLDNPDIMKFYKPVERINCGEGMDWV------MCEKSICFVRPEIA-----SSHEDVICSY 111
            .|::.....|.|..:.|.....|......|      ..::.:.|:...:|     |:..:..|.|
  Fly    75 IPYVDPFASDAMAIFHPEHFETCSNETALVTPIYDISRQRYVLFINESLASIILNSNGGEYNCYY 139

  Fly   112 TDII--RKSD-YKVRFGQSLRMKEPYVLQASDF------VKVVCRSSSGESWFGMAHGIRDTVPR 167
            .:|.  ||.| |.       :|:..|..|..:.      :.:.|.....||....:........|
  Fly   140 QEITRDRKHDSYD-------KMERKYFSQNYEVPLHVEGLILTCHRLGNESDILQSDAYNLIQYR 197

  Fly   168 PPASNFSPNLAVLPPEAVAQAQQQMQDGATAPIYNVLMFGFDSLSRNAFIRKLPRTYEYLTQQLG 232
            ||....|...:...|                   :|||||.|||||....|.:|:.|::||:. |
  Fly   198 PPPKGLSLKPSKRKP-------------------SVLMFGIDSLSRINLRRTMPKVYKFLTRD-G 242

  Fly   233 ATVLKGYNIVGDGTPQALVPLLTGFTELELPETR-KRLSG---AGSVDSYPMIWKDFARLGYMTS 293
            ....:|||.:||.|...|:.:|||:.    ||:. |::..   .|.:|..|.||..|....|:|:
  Fly   243 WFEQQGYNKIGDNTFPNLLAILTGYN----PESAIKKVCNWHEDGCLDRTPFIWHYFRNASYLTA 303

  Fly   294 FNEDLPNVGTFTYRMTGFEAQPVDHYLRTYYVQAEHMAAESKPN-----------CIGHQPDHIT 347
            :.||...:.||.|...||..||.|.|||..     ..|.||..|           |||.:.....
  Fly   304 YAEDEAGINTFNYWKPGFLEQPTDFYLRPL-----QKAIESGLNTWKCSDCSMKYCIGRRITSSY 363

  Fly   348 MLEYTKNFMLKYRD-APRFAFSFHGGLSHDSINLVGAADDDVHDWLVALKERSLLDDTILIMMAD 411
            ..:..:||..::.| .|.:...:....||||..:....:|.|..:|:..:...:.|.:|::.::|
  Fly   364 AYDMARNFANRFVDERPIWGLFWSNSFSHDSFQMPSKMEDYVLQYLLDFEADGVFDQSIMVFLSD 428

  Fly   412 HGNRFAEVRATLQGKQEERLPFFSFVFPESFKKRFPQEYKNFLANEHHLTTPFDIHATLKHVIQL 476
            ||:|:..:.:...|..|||||......|..|:.::|:..:....|.:.||:.:|:|.||||:|:|
  Fly   429 HGSRYGRLMSLPSGFLEERLPSMFIYLPPWFRAQYPEYARALELNRNRLTSNYDLHNTLKHIIEL 493

  Fly   477 QTAVDQFGEINDPKTETSPPGIRISELARGRAMSLLDPIPSNRSCADAYIEPHWCACLNWLPLQL 541
            ....|  |: ..||....|           :..||..|:...|||.||.|..|:|.|   :|.:.
  Fly   494 GGTPD--GQ-TLPKAADCP-----------KCQSLFYPVDETRSCEDAGIPEHFCTC---VPYKR 541

  Fly   542 NDSRYTGIILKAAQSIVNAIN--LATVEQRQYCAPLE---IHRVNWALRLQ-------PHKELLQ 594
            .|:::...|   |..::..||  ||.....:.|:.|.   ||.....:.|.       |..||..
  Fly   542 LDTQWAKSI---APKVIGRINEYLAGRNLSKICSELTLSYIHLTEMKVELDQNFHDDVPRAELGT 603

  Fly   595 FRTNSDRDGFLADMTGQTLVRDEMYQLQVVTMPGEGLFEASVAYSLHTFSATTKLTDISRVNKYG 659
            :||                    |::::    .....|.|:|.::..|.|...::..|||::.|.
  Fly   604 YRT--------------------MFKVK----QNSADFRATVIFNNVTDSVEVEVPTISRLDSYE 644

  Fly   660 NQARCIYDRDPELRKYCYCR 679
            |.:.|:.|:..::  ||.|:
  Fly   645 NVSTCVKDKTDKM--YCICK 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6236NP_650446.2 DUF229 73..581 CDD:281053 147/548 (27%)
ALP_like 201..477 CDD:293745 93/291 (32%)
CG9988NP_651625.1 DUF229 90..580 CDD:281053 145/545 (27%)
ALP_like 212..493 CDD:293745 94/309 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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