DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6236 and CG7120

DIOPT Version :9

Sequence 1:NP_650446.2 Gene:CG6236 / 41857 FlyBaseID:FBgn0038318 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001246667.1 Gene:CG7120 / 38954 FlyBaseID:FBgn0035888 Length:701 Species:Drosophila melanogaster


Alignment Length:668 Identity:179/668 - (26%)
Similarity:293/668 - (43%) Gaps:117/668 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VNRGECRHPHLPLDNPDIMKFYKPVERINC------------GEGMDWVMCEKSICFVRPEIASS 103
            |....||...:.....::|:.:|.::..:|            .:...:::......|.|..:.  
  Fly   108 VYSNSCRIMEVDPYKNEVMRHFKRIKYKSCQKLTPLTQVKFEAKSQKYLLSIDGAAFGRYPVG-- 170

  Fly   104 HEDVICSYTDIIRKSDYKVRFGQSLRMKEPYVL-QASDFVKVVCRSSSGESWFGMAHGIRDTVPR 167
             :.:.|.|..:.|..:.||::.:....|...:| .:::.:.|.| .|.|...:...|        
  Fly   171 -KQLHCCYMSVQRVDEMKVKYTKCQTFKGSILLPDSAEGIIVKC-DSGGRQIYINGH-------- 225

  Fly   168 PPASNFSPNLAVLPPEAVAQAQQQMQDGATAPIY----NVLMFGFDSLSRNAFIRKLPRTYEYLT 228
                      |.:|.:...|.:.:|...|.|..|    :|||.|.||:||...||.:|:|.:||.
  Fly   226 ----------ATVPVKEAVQQRLRMASEADAKGYQRPPSVLMLGIDSISRVNLIRAMPKTAQYLY 280

  Fly   229 QQLGATVLKGYNIVGDGTPQALVPLLTGFTELELPETRKRLSG--AGSVDSYPMIWKDFARLGYM 291
            .. |...|.|||.|.|.|...::.:|||:   .||......|.  .|.:|....|||.:.:.||:
  Fly   281 DN-GWFELAGYNKVDDNTFPNIMAVLTGY---NLPNAMHACSPFVVGGLDKCDYIWKQYQQRGYV 341

  Fly   292 TSFNEDLPNVGTFTYRMTGFEAQPVDHYLRTYYVQAE----HMAAESKPNCIGH--QPDHI--TM 348
            |::.||...:.||.|...||:..|.|:|||.|...||    |.......:|:|:  ..:|:  ..
  Fly   342 TAYAEDAVKINTFNYLKKGFKNPPADYYLRPYLSAAESQLDHTTVNGLVHCLGYLTAAEHVYDYG 406

  Fly   349 LEYTKNFMLKYRDAPRFAFSFHGGLSHDSINLVGAADDDVHDWLVALKERSLLDDTILIMMADHG 413
            ||:|:.|:    :...|.|.:....||..|:...:.|..:.::|..|..:..:::|:::..:|||
  Fly   407 LEFTRRFL----NETYFGFFWTNTHSHSDISQTSSMDSYMEEYLRKLVRQGTMENTVVVFFSDHG 467

  Fly   414 NRFAEVRATLQGKQEERLPFFSFVFPESFKKRFPQEYKNFLANEHHLTTPFDIHATLKHVIQL-- 476
            .||...|||..|..|||||......|:..::..||..::...|.:.||||:|:|.|:||::.:  
  Fly   468 MRFGPTRATWSGHLEERLPAIFIWLPQHLRRSHPQFVRSLQLNRNRLTTPYDLHLTMKHILAISG 532

  Fly   477 QTAVDQFGEIND-PKTETSPPGIRISELARGRAMSLLDPIPSNRSCADAYIEPHWCACLNW--LP 538
            :..::..|...| |:.:                 |||.|:...|||:|..|..|||.|..:  :.
  Fly   533 RAEMESLGPAPDCPQCQ-----------------SLLTPVSPQRSCSDVGIADHWCTCWEYDTIS 580

  Fly   539 LQLNDSRYTGIILKAAQSIVNAINLATVEQR-----QYCAPLEIHRVNWALRLQPHKELLQFRTN 598
            ....:||..|      :.:|:.:|....|.|     :.||||.:|.:..|.|  .|...|.    
  Fly   581 STSKESRMLG------KRVVSYLNNYVAEFRNGTFAKLCAPLSLHSIKSAFR--AHHNALD---- 633

  Fly   599 SDRDGFLADMTGQTLVRDEM--YQLQVVTMPGEGLFEASVAYSLHTFSATTKLTDISRVNKYGNQ 661
                            .||:  |:|..||.|.:|.:||::.:: ||..:......:||:|.|..:
  Fly   634 ----------------PDEVHTYRLIFVTSPNKGQYEATLRHN-HTDDSVKVTGSVSRLNVYSGE 681

  Fly   662 ARCIYDRDPELRKYCYCR 679
            |.|:  .|...:||||||
  Fly   682 ADCM--NDFAAKKYCYCR 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6236NP_650446.2 DUF229 73..581 CDD:281053 146/544 (27%)
ALP_like 201..477 CDD:293745 96/291 (33%)
CG7120NP_001246667.1 DUF229 130..622 CDD:281053 146/544 (27%)
ALP_like 253..528 CDD:293745 95/282 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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