DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6236 and CG1428

DIOPT Version :9

Sequence 1:NP_650446.2 Gene:CG6236 / 41857 FlyBaseID:FBgn0038318 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_610127.1 Gene:CG1428 / 35433 FlyBaseID:FBgn0032967 Length:617 Species:Drosophila melanogaster


Alignment Length:668 Identity:158/668 - (23%)
Similarity:263/668 - (39%) Gaps:174/668 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 FY---KPVERINC----------GEGMDWVMCEKSICFVRPEIASSHEDVICSY----------- 111
            ||   :||.::.|          .:|.:::           |.....||:.|.|           
  Fly    63 FYSAIEPVNKLRCRMTQLLTAITQDGSNFL-----------EAKRISEDLSCRYWLKSGHTRNHS 116

  Fly   112 --------TDIIRKSDYKVRFG---QSLRMKEPYVLQASDFVKVVCRSSSGESWFGMAHGIRDTV 165
                    .|:.|.:..|::.|   |.:|      ::.||..|                      
  Fly   117 GHYTAYGHFDLKRGATRKIKIGTGEQIVR------IRCSDKFK---------------------- 153

  Fly   166 PRPPASNFSPNLAVL-PPEAVAQAQQQMQDGATAPIYNVLMFGFDSLSRNAFIRKLPRTYEYLTQ 229
                ||.:...|..| ||:....:.:..:.      .:|::.|.||:|...|:|..|....:| :
  Fly   154 ----ASKYHDVLYFLSPPDPKLMSTESSEK------LSVMVLGIDSVSHMHFVRYFPLVMAFL-E 207

  Fly   230 QLGATVLKGYNIVGDGTPQALVPLLTGFTELELPETRKRLSGAGS---VDSYPMIWKDFARLGYM 291
            ....|...||:.||......|||.|.|          |....|||   .|....:|..|...||.
  Fly   208 NHPHTKFFGYSRVGLDANANLVPFLGG----------KSSRAAGSDILSDEKAWLWDSFKMEGYS 262

  Fly   292 TSFNEDLPNVGTFTYRMTG---FEAQPVDHYLRTYYVQAEH-----MAAESKPNCIGHQPDHITM 348
            |::.||  |.........|   ....|||..|....|:..:     :..:...:|...:.....:
  Fly   263 TAYGED--NAKGILSNRNGDKELPKSPVDFDLTPVIVEMNNHTRYSIDLKEMIHCTAGRKFQDVL 325

  Fly   349 LEYTKNFMLKYRDAPRFAF-------------SFHGGLSHDSINLVGAADDDVHDWLVALKERSL 400
            .::....:...:..|.|:|             ::|..||:..:             |..|.:..:
  Fly   326 RDFVLQLVPYMQGMPFFSFFWQSQGVQEYYEYAWHLDLSYMML-------------LKKLLDADI 377

  Fly   401 LDDTILIMMADHGNRFAEVRATLQGKQEERLPFFSFVFPESFKKRFPQEYKNFLANEHHLTTPFD 465
            |::|:|.:|:|||.|..|.|.:|||.:||..|....::||..|:::|....|..:|.|.|.||:|
  Fly   378 LNNTLLFLMSDHGLRAGEYRMSLQGMKEESQPLMVAIYPEWLKRKYPLAVGNLESNAHSLITPYD 442

  Fly   466 IHATLKHVIQLQTAVDQFGEINDPKTETSPPGIRISELARGRAMSLLDPIPSNRSCADAYIEPHW 530
            :..||..||.|....|...|::..:.::.||    :.|.||  :||..|||.:|:|..|:|...:
  Fly   443 LRETLADVIALGQLKDANIEVSMKRLQSHPP----NRLPRG--ISLFLPIPDHRTCDLAHIPSLF 501

  Fly   531 CACLNWLPLQLNDSRYTGIILKAAQSIVNAINLATVEQRQYCAPLEIHRVNWALRLQPHKELLQF 595
            |.|.....:..:|    |::|::::.:|.:|| ..::....|..|::..|           ||..
  Fly   502 CFCRELTEVPTDD----GLVLRSSRFMVESIN-QLIKPFGQCRQLKLEMV-----------LLAH 550

  Fly   596 RTNSDRDGFLADMTGQTLVRDEMYQLQVVTMPGEGLFEASVAYSLHTFSATTKLTDISRVNKYGN 660
            ..:...:.|:.::           :|:|.|.||.|::||:|..|    ......:.||||:.|..
  Fly   551 FLDFGEESFVYEL-----------RLRVRTSPGNGVYEATVRLS----DVLLLTSPISRVSHYLG 600

  Fly   661 QARCIYDRDPELRKYCYC 678
            |:.||  .||:|:.:|.|
  Fly   601 QSHCI--GDPDLQIFCLC 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6236NP_650446.2 DUF229 73..581 CDD:281053 129/564 (23%)
ALP_like 201..477 CDD:293745 78/299 (26%)
CG1428NP_610127.1 DUF229 68..547 CDD:281053 130/575 (23%)
ALP_like 180..453 CDD:293745 78/298 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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