DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6236 and CG16854

DIOPT Version :9

Sequence 1:NP_650446.2 Gene:CG6236 / 41857 FlyBaseID:FBgn0038318 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001245974.1 Gene:CG16854 / 34539 FlyBaseID:FBgn0032338 Length:705 Species:Drosophila melanogaster


Alignment Length:709 Identity:211/709 - (29%)
Similarity:332/709 - (46%) Gaps:88/709 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RGTVPKIAA---CCCVVVLLVTWYVLNVE----RD-LDKSLKIE-IIERSIRSA--VNRGECRHP 59
            ||...|:..   ..||...|...|.|..:    || .|...:|| ....::.:|  |:...||.|
  Fly    47 RGQFKKVVIVIFALCVFSYLCVDYNLRTKLLRFRDGFDFMARIEDHYGGNVTTAYFVDTTGCRMP 111

  Fly    60 HLPLDNPDIMKF-YKPVERINCGEGM----DWVMCEKSICFVRPEI-----ASSHEDVICSYTDI 114
            |..:.:..|.:| :|| ...:|...:    |.:..:..:.....|:     .|....|.|:||::
  Fly   112 HFEVSDDTIAQFIFKP-RPYSCNRALIRTSDTIPGQLHLNLEASELLAYYNISDLSSVNCNYTEV 175

  Fly   115 IRKSDYKVRFGQSLRMKEPYVLQ---ASDFVKVVCRSSSGESWFGMAHGIRDTVP--RPPASNFS 174
            .||:|.......::..|...|::   :|:|:.:.|..|..:.::...|......|  |||....:
  Fly   176 KRKTDSSNTHSPAVSFKLDKVMKLPLSSEFICMWCYDSLDKLFYKDCHFFAVDKPRIRPPLKTGT 240

  Fly   175 PNLAVLPPEAVAQAQQQMQDGATAPIYNVLMFGFDSLSRNAFIRKLPRTYEYLTQQLGATVLKGY 239
            ..::.   ....:.|:::         :|::.|.||||...|:|::.||..|:.:.|......||
  Fly   241 DRVSF---NKSKEEQERL---------SVMILGMDSLSHLNFLRQMRRTANYVRKHLSHVEFWGY 293

  Fly   240 NIVGDGTPQALVPLLTGFTELEL-----PETRKRLSGAGSVDSYPMIWKDFARLGYMTSFNEDLP 299
            |.|||.|...|||||:|..:.||     |:|.:      |.|....|||.:.:|||.:.|.||:.
  Fly   294 NKVGDNTFPNLVPLLSGLDDQELNLACTPKTLR------SYDRCSFIWKRYQQLGYRSIFAEDVA 352

  Fly   300 NVGTFTYRMTGFEAQPVDHYLRTYYVQAEHMAAESKP----NCIGHQPDHITMLEYTKNFMLKYR 360
            .:..|.|...||..||.|:|||...::.|...|..|.    .|:|.:.....:|||.|..:.:..
  Fly   353 MLSAFNYNQNGFRKQPTDYYLRPMIMEMEKTVAFKKDLNMHLCMGSRRTADVLLEYMKKLVPRMS 417

  Fly   361 DAPRFAFSFHGGLSHDSINLVGAADDDVHDWLVALKERSLLDDTILIMMADHGNRFAEVRATLQG 425
            ....|:|.:...|:||..|.....|:.:...|:.|::..||:.|::::::|||.|:...|.|.||
  Fly   418 RDLYFSFFWTVALTHDYFNFPSLLDEAMLQQLMQLQDSGLLNRTVVMLLSDHGLRWGSFRRTYQG 482

  Fly   426 KQEERLPFFSFVFPESFKKRFPQEYKNFLANEHHLTTPFDIHATLKHVIQLQTAVDQFGEINDPK 490
            ..|||.|....::|....:|:|:...|...|...||||||:|||:..::.|...  :..::....
  Fly   483 MMEERQPLMMLLYPPWMTERYPEAIANLRLNARRLTTPFDVHATMLQLLNLHNL--EADQLQRRS 545

  Fly   491 TETSPPGIRISELARGRAMSLLDPIPSNRSCADAYIEPHWCACLNWLPLQLNDSRYTGIILKAAQ 555
            ||...|.   |.|.||  :||..|||:.|:|..|.|..|||.|.....||.||.|    :.:||:
  Fly   546 TEMDEPD---STLPRG--ISLFLPIPAARTCEQAGIAAHWCTCHQRQELQTNDPR----VQRAAR 601

  Fly   556 SIVNAINLATVEQRQYCAPLEIHRVNWALRLQPHKELLQFRTNSDRDGFLADMTGQTLVRDEMYQ 620
            .:|..||....:..| |..|.::.:..||...||.::::   |...| :..|:|           
  Fly   602 YLVRLINNRLKDSSQ-CRTLYLNSILQALIAAPHSKIVK---NISTD-YAVDIT----------- 650

  Fly   621 LQVVTMPGEGLFEASVAYSLHTFSATTKLT-DISRVNKYGNQARCIYDRDPELRKYCYC 678
            |::.|.||.|:||::|..:    ..||.|| .|||:|.||:|:.|:  .||.|:.:|||
  Fly   651 LRLQTKPGLGVFESTVRMT----GYTTVLTGTISRLNLYGSQSYCL--NDPALKMFCYC 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6236NP_650446.2 DUF229 73..581 CDD:281053 156/530 (29%)
ALP_like 201..477 CDD:293745 97/284 (34%)
CG16854NP_001245974.1 DUF229 126..626 CDD:281053 156/530 (29%)
ALP_like 255..533 CDD:293745 97/292 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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