DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6276 and madf-10

DIOPT Version :10

Sequence 1:NP_650445.3 Gene:CG6276 / 41855 FlyBaseID:FBgn0038316 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_492729.1 Gene:madf-10 / 190925 WormBaseID:WBGene00013717 Length:234 Species:Caenorhabditis elegans


Alignment Length:223 Identity:41/223 - (18%)
Similarity:72/223 - (32%) Gaps:79/223 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSFKPYQKPPFFTAEFPVKQKSE-IGIESKTSKINYME---RTLENGNVVKIQVVNENAVR---- 58
            |:..|.::.|..|.|....:..| :..|.:..|....|   :.:|...|.::    |.|:|    
 Worm    86 STPSPAKRSPAATLESAKNRNGEKLKREEEERKRRQREAELKLIEEETVKRV----EEAIRKKVE 146

  Fly    59 -------------TLLANGFKKSYPAPEEETAIETDPENTQHVICRPSPILPCFKNFTPFTLASF 110
                         |||..|.|:.    .||.|.:.:.|..                      ||.
 Worm   147 ESLQSEKIKMEILTLLEEGRKRL----NEEVAAQLEEEKE----------------------ASL 185

  Fly   111 LQ-PGLEEILQYQAEKRSGCIKST-----HSPTSEEMYIAAVKDNPY---PQIKSKKQKALRGRF 166
            :: ...||..|.:.|:|....:..     .:...|.|.....::..|   .:::.:|::|:|   
 Worm   186 IEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEELQRQKEEAMR--- 247

  Fly   167 PRASQKSVLEQIMVDAEKNASEREEMVR 194
                            .|.|.|.||.::
 Worm   248 ----------------RKKAEEEEERLK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6276NP_650445.3 MADF 32..116 CDD:214738 18/104 (17%)
BESS 431..465 CDD:460758
madf-10NP_492729.1 MADF 53..147 CDD:214738 14/64 (22%)
Blue background indicates that the domain is not in the aligned region.

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