DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6276 and madf-8

DIOPT Version :9

Sequence 1:NP_650445.3 Gene:CG6276 / 41855 FlyBaseID:FBgn0038316 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_497739.1 Gene:madf-8 / 183517 WormBaseID:WBGene00008118 Length:300 Species:Caenorhabditis elegans


Alignment Length:114 Identity:25/114 - (21%)
Similarity:44/114 - (38%) Gaps:11/114 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EEVFKLIEIVQRDEAIYNPRHKYYFCRPYVENFWREVDLKLEKNPGASLAKWTNLRISFRREYTN 92
            |:|:.:|..|::...:::.|...:.........|.::||:|..:....||:...:..|.|..:.:
 Worm   131 EKVYDIIYAVRKRPILWDQRLICHRNSNLSRRAWDQLDLELGIDEEYPLARRKQIWKSKRDYFVS 195

  Fly    93 YLEEKVPPCWSYFDRMFFLHPY--------LRKKHQQPKSLDTQVQDAL 133
            .:.......|.|.|.:.|..|.        ||....||..   .|.|.|
 Worm   196 AVNAANLRKWIYADALEFYRPMINFRTTFCLRPTVAQPSQ---SVHDKL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6276NP_650445.3 MADF 32..116 CDD:214738 16/91 (18%)
BESS 431..465 CDD:281011
madf-8NP_497739.1 MADF 135..219 CDD:214738 16/83 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156237
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12243
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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