DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6276 and madf-2

DIOPT Version :9

Sequence 1:NP_650445.3 Gene:CG6276 / 41855 FlyBaseID:FBgn0038316 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_492896.1 Gene:madf-2 / 173019 WormBaseID:WBGene00009461 Length:290 Species:Caenorhabditis elegans


Alignment Length:334 Identity:66/334 - (19%)
Similarity:111/334 - (33%) Gaps:122/334 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SNPNTSCSASRWLTEEVFKLIEIVQRDEAIYNPRHKYYF----CRPYVENFWREVDLKLEKNPGA 74
            ::|:..|            ||..::....|::   |.||    .|....:..|||..:|......
 Worm     5 TDPSRQC------------LINAIRNRPVIWD---KNYFGESNYRTLKTSCLREVTSELNSMFQM 54

  Fly    75 SL--------AKWTNLRISFRREYT-----NYLEEKV-PPCWSYFDRMFFLHPYLRKKHQQPKSL 125
            .:        ::|.||:.:|.|:..     .|:|:.: .|.|.::..:.||      ..::.|.|
 Worm    55 PIKFTCEDVRSQWKNLKDTFVRKLRWVHEGKYMEDAMKEPTWKFYRMLTFL------DEKEAKRL 113

  Fly   126 DTQVQDALAHLSNLSSRMQRERSVTIPGSSSIGG------QPTPSA--------HQSPPAQQLDN 176
            .    |...|...|:           |.|:|.|.      :||.:.        :|.||.....:
 Worm   114 G----DTCEHTYELA-----------PNSTSCGQRAQISYEPTSTEEKMFQMFNNQPPPQLSQQS 163

  Fly   177 YLDYFDEAEHNN---------------------------------SELDDIMEEEQQRNSRYHGQ 208
            .:|....|..:|                                 |.|::.:|:|.::..|    
 Worm   164 MIDSSQIATCSNEPKMTSSSTFVTSSTSLKRGVHYSPTRSPNGSSSGLEEELEDEDEQPGR---- 224

  Fly   209 LDGNDIKSECEEPVDDYE--QEAHEPEEDEQDDQDLHKMAPTSSSSSAEAQRRYANQHSHASRML 271
                  |..|...|.:.:  |....|....||:.| |..|..:::     .||.||:.   .||.
 Worm   225 ------KKSCRRQVSNIQPMQVITTPPVAHQDEFD-HFGAMVAAN-----LRRIANEQ---GRMN 274

  Fly   272 PGRLQMRTY 280
            ..|:|.|.|
 Worm   275 ALRVQRRLY 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6276NP_650445.3 MADF 32..116 CDD:214738 22/101 (22%)
BESS 431..465 CDD:281011
madf-2NP_492896.1 MADF 11..107 CDD:214738 23/116 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156219
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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