DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm2 and AT5G03660

DIOPT Version :9

Sequence 1:NP_001262592.1 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_568126.1 Gene:AT5G03660 / 831768 AraportID:AT5G03660 Length:173 Species:Arabidopsis thaliana


Alignment Length:179 Identity:44/179 - (24%)
Similarity:90/179 - (50%) Gaps:18/179 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 TESEVATQNRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVLENRSQQDEERMDQLT 145
            ||:.....:.:.:::::.|  ||..|.::|.|        .|::.:.....:..:..||.:::..
plant     4 TETSQPAPSDQGRRLKDQL--SESMSFSSQMK--------KEDDELSMKALSAFKAKEEEIEKKK 58

  Fly   146 NQLKEARMLAEDADTKSDEVSRKLAFVEDELEVAEDRVRSG----ESKIMELEEELKVVGNSLKS 206
            .:::| |:.|:..  :.::.|::||.:.:|||...|.:|..    ..||..|::|||.:||:::.
plant    59 MEIRE-RVQAQLG--RVEDESKRLAMIREELEGFADPMRKEVTMVRKKIDSLDKELKPLGNTVQK 120

  Fly   207 LEVSEEKANQRVEEFKREMKTLSIKLKEAEQRAEHAE-KQVKRLQKEVD 254
            .|...:.|.:...|..:|...|..||:|.|..:|... |:::.|.|.:|
plant   121 KETEYKDALEAFNEKNKEKVELITKLQELEGESEKFRFKKLEELSKNID 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_001262592.1 Tropomyosin 48..281 CDD:395200 44/179 (25%)
AT5G03660NP_568126.1 Transcrip_act 21..169 CDD:398553 41/160 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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