DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Tm2 and AT3G52920

DIOPT Version :9

Sequence 1:	NP_001262592.1	Gene:	Tm2 / 41853	FlyBaseID:	FBgn0004117	Length:	284	Species:	Drosophila melanogaster
Sequence 2:	NP_566974.1	Gene:	AT3G52920 / 824458	AraportID:	AT3G52920	Length:	180	Species:	Arabidopsis thaliana

Alignment Length:	174	Identity:	40/174 - (22%)
Similarity:	85/174 - (48%)	Gaps:	14/174 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   102 SEERSTTAQQKLLE---ATQSADENNRMCKVLENRSQQDEERMDQLTNQLKEARMLAEDADTKSD 163
            :.|.:|...|:::.   ::|.:.|:..|.:...:..:..|:.:::...:::| |:.|:..  :.:
plant     4 TNEATTQPPQQMMSLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRE-RVKAQLG--RVE 65

  Fly   164 EVSRKLAFVEDELEVAEDRVRSG----ESKIMELEEELKVVGNSLKSLEVSEEKANQRVEEFKRE 224
            |.:|:||.:.:|||...|.:|..    ..||..:.:|||.:|::::..|...::|.....|..||
plant    66 EETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNRE 130

  Fly   225 MKTLSIKLKEAEQRAEHAE----KQVKRLQKEVDRLEDELGINK 264
            ...|..||.|..|....:|    |::..|.:.:|...:.:..:|
plant   131 KVQLITKLMEMGQLVGESEKLRLKKLDELSRSIDTESESISQDK 174

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Tm2	NP_001262592.1	Tropomyosin	48..281	CDD:395200	40/174 (23%)
AT3G52920	NP_566974.1	Transcrip_act	22..165	CDD:398553	35/145 (24%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000