DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm2 and AT3G52900

DIOPT Version :9

Sequence 1:NP_001262592.1 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_190858.1 Gene:AT3G52900 / 824456 AraportID:AT3G52900 Length:164 Species:Arabidopsis thaliana


Alignment Length:171 Identity:39/171 - (22%)
Similarity:71/171 - (41%) Gaps:43/171 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 DENNRMCKVLENRSQQDEERMDQLTNQLKEARMLAEDADTKSDEVSRKLAFVE----------DE 175
            :|...:.||...|.|..||.:::....:||             :|.::|.|.|          :|
plant    26 NEEEEIWKVAVTRFQAREEEIERKKMTVKE-------------KVQQRLGFAEEATRCLTQTLEE 77

  Fly   176 LEVAEDRVRSGESKIMELEEELKVVGNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRAE 240
            ||:..|.:|   .::..:.:::.:....:|||..|.:|   :.:|:|..::..:.|.||    ..
plant    78 LEIMGDPMR---KEVGMVRKKIDMANRDIKSLAQSCQK---KEKEYKDTLEAFNEKNKE----KA 132

  Fly   241 HAEKQVKRLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 281
            |....:..|..|.:||         |.|.| :|::.|...|
plant   133 HLVSMLMELLAESERL---------RIKKL-EEINKTVGTL 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_001262592.1 Tropomyosin 48..281 CDD:395200 38/169 (22%)
AT3G52900NP_190858.1 Transcrip_act 13..162 CDD:398553 38/168 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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