DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm2 and AT3G09980

DIOPT Version :9

Sequence 1:NP_001262592.1 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_187609.2 Gene:AT3G09980 / 820159 AraportID:AT3G09980 Length:178 Species:Arabidopsis thaliana


Alignment Length:146 Identity:35/146 - (23%)
Similarity:75/146 - (51%) Gaps:8/146 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ATQSADENNRMCKVLENRSQQDEERMDQLTNQLKEARMLAEDADTKSDEVSRKLAFVEDELEVAE 180
            ::|.:.|:..|.:...:..:..||.:::...:::| |:.|:..  :.:|.:::||.:.:|||...
plant    35 SSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRE-RVQAQLG--RVEEETKRLALIREELEGLA 96

  Fly   181 DRVRSG----ESKIMELEEELKVVGNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRAEH 241
            |.:|..    ..||..:.:|||.:|::::..|...::|.:...|..||...|..:|.|....:|.
plant    97 DPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGESEK 161

  Fly   242 AE-KQVKRLQKEVDRL 256
            .. |:::.|.|.:|.:
plant   162 MRMKKLEELSKNIDSI 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_001262592.1 Tropomyosin 48..281 CDD:395200 35/146 (24%)
AT3G09980NP_187609.2 Transcrip_act 26..176 CDD:398553 34/143 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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