DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm2 and TPM1

DIOPT Version :9

Sequence 1:NP_001262592.1 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001352707.1 Gene:TPM1 / 7168 HGNCID:12010 Length:326 Species:Homo sapiens


Alignment Length:323 Identity:136/323 - (42%)
Similarity:194/323 - (60%) Gaps:42/323 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAIKKKMQAMKLEKDNAIDKADTCENQAKDANSRADKLNEEV-------------RD------- 45
            |||||||||.:||:|:||:|:|:..|...|.|..|:.:|.|::             ||       
Human     1 MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEEDIAAKEKLLRVSEDERDRVLEELH 65

  Fly    46 ----------------------LEKKFVQVEIDLVTAKEQLEKANTELEEKEKLLTATESEVATQ 88
                                  |:||....|.:|....|.|:.|..:||..||..|..|::||:.
Human    66 KAEDSLLAAEEAAAKLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASL 130

  Fly    89 NRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVLENRSQQDEERMDQLTNQLKEARM 153
            ||::|.:||:|::::||..||.|||.||.::|||:.|..||:|:|:|:|||:|:....|||||:.
Human   131 NRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKH 195

  Fly   154 LAEDADTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELEEELKVVGNSLKSLEVSEEKANQRV 218
            :|||||.|.:||:|||..:|.:||.||:|....|.|..|||||||.|.|:|||||...||.:|:.
Human   196 IAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKE 260

  Fly   219 EEFKREMKTLSIKLKEAEQRAEHAEKQVKRLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 281
            :.::.|:|.||.||||||.|||.||:.|.:|:|.:|.||:::...|:...|:...:|.|..||
Human   261 DRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLEL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_001262592.1 Tropomyosin 48..281 CDD:395200 109/232 (47%)
TPM1NP_001352707.1 8a0101 1..>159 CDD:273385 54/157 (34%)
Tropomyosin 90..324 CDD:365985 111/234 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147725
Domainoid 1 1.000 247 1.000 Domainoid score I2154
eggNOG 1 0.900 - - E1_KOG1003
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48449
OrthoDB 1 1.010 - - D1576041at2759
OrthoFinder 1 1.000 - - FOG0002679
OrthoInspector 1 1.000 - - mtm8448
orthoMCL 1 0.900 - - OOG6_101961
Panther 1 1.100 - - O PTHR19269
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X463
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.720

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