DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm2 and tpm4

DIOPT Version :10

Sequence 1:NP_524361.4 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_012818712.1 Gene:tpm4 / 549841 XenbaseID:XB-GENE-6077097 Length:284 Species:Xenopus tropicalis


Alignment Length:281 Identity:130/281 - (46%)
Similarity:189/281 - (67%) Gaps:0/281 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAIKKKMQAMKLEKDNAIDKADTCENQAKDANSRADKLNEEVRDLEKKFVQVEIDLVTAKEQLE 65
            |:|||||||.:||:|:||||:|:..|...|.|..:..::.:|:..|:||....|.:|....|.|:
 Frog     1 MEAIKKKMQMLKLDKENAIDRAEQAEADKKAAEDKCKQVEDELVALQKKLKGTEDELDKYSEALK 65

  Fly    66 KANTELEEKEKLLTATESEVATQNRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVL 130
            .|..:||:.:|..|..|.|||..||::|.:||:|::::||..||.|||.||.::|||:.|..||:
 Frog    66 DAQEKLEQADKKATDAEGEVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130

  Fly   131 ENRSQQDEERMDQLTNQLKEARMLAEDADTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELEE 195
            |||:.:|||:|:....|||||:.:||:||.|.:||:|||..:|.|||.||:|....|.|..:|||
 Frog   131 ENRAMKDEEKMEIQELQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCSDLEE 195

  Fly   196 ELKVVGNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRAEHAEKQVKRLQKEVDRLEDEL 260
            |||.|.|:|||||...||.:::.::::.|:|.|:.||||||.|||.||:.|.:|:|.:|.|||:|
 Frog   196 ELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKL 260

  Fly   261 GINKDRYKSLADEMDSTFAEL 281
            ...|:....:...:|.|..||
 Frog   261 ATAKEENLGMHQVLDQTLQEL 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_524361.4 Tropomyosin 48..281 CDD:459736 107/232 (46%)
tpm4XP_012818712.1 Tropomyosin 48..281 CDD:459736 107/232 (46%)

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