DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm2 and tpm1

DIOPT Version :10

Sequence 1:NP_524361.4 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_031753701.1 Gene:tpm1 / 448541 XenbaseID:XB-GENE-485946 Length:326 Species:Xenopus tropicalis


Alignment Length:323 Identity:134/323 - (41%)
Similarity:196/323 - (60%) Gaps:42/323 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAIKKKMQAMKLEKDNAIDKADTCENQAKDANSRADKLNEEVRDLEKK--------------FV 51
            |||||||||.:||:|:||:|:|:..|...|.|..::.:|.||:..|||:              |.
 Frog     1 MDAIKKKMQMLKLDKENALDRAEQAEADKKGAEEKSKQLEEEIAQLEKQLRVTEDTRDKIMDDFH 65

  Fly    52 QVEIDLVTAKEQ----------------------------LEKANTELEEKEKLLTATESEVATQ 88
            ..|..|:.|:|:                            |:.|..:||..||..|..|.:||:.
 Frog    66 HAEESLLAAEEKATKLEDELVALQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEGDVASL 130

  Fly    89 NRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVLENRSQQDEERMDQLTNQLKEARM 153
            ||::|.:||:|::::||..||.|||.||.::|||:.|..||:|||:.:|||:|:....|||||:.
 Frog   131 NRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKH 195

  Fly   154 LAEDADTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELEEELKVVGNSLKSLEVSEEKANQRV 218
            :||:||.|.:||:|||..:|.:||.||:|....|||..|||||||.|.|:|||||...||.:|:.
 Frog   196 IAEEADRKYEEVARKLVIIEGDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKE 260

  Fly   219 EEFKREMKTLSIKLKEAEQRAEHAEKQVKRLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 281
            ::::.|:|.|:.||||||.|||.||:.|.:|:|.:|.||:::...|:...::...:|.|..||
 Frog   261 DKYEEEIKVLTDKLKEAETRAEFAERTVAKLEKTIDDLEEKVTHAKEENLNMHQMLDQTLLEL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_524361.4 Tropomyosin 48..281 CDD:459736 108/274 (39%)
tpm1XP_031753701.1 COG4913 <1..>158 CDD:443941 53/156 (34%)
Tropomyosin 90..324 CDD:459736 104/234 (44%)

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