DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm2 and tpm2

DIOPT Version :9

Sequence 1:NP_001262592.1 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001002119.1 Gene:tpm2 / 415209 ZFINID:ZDB-GENE-040625-114 Length:284 Species:Danio rerio


Alignment Length:275 Identity:131/275 - (47%)
Similarity:193/275 - (70%) Gaps:0/275 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAIKKKMQAMKLEKDNAIDKADTCENQAKDANSRADKLNEEVRDLEKKFVQVEIDLVTAKEQLE 65
            |:|||||||.:||:|:||||:|:..|...|.|..:..:|.||:..|:||...||.:|....|.|:
Zfish     1 MEAIKKKMQMLKLDKENAIDRAEQAEIDKKGAEDKCKQLEEELLALQKKLKGVEDELDKYSESLK 65

  Fly    66 KANTELEEKEKLLTATESEVATQNRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVL 130
            .|..:||:.||.....|:|||:.||::|.:||:|::::||..||.|||.||.::|||:.|..||:
Zfish    66 DAQEKLEQAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130

  Fly   131 ENRSQQDEERMDQLTNQLKEARMLAEDADTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELEE 195
            |||:.:|||:|:....|||||:.:||:||.|.:||:|||..:|.|||.:|:|....|:|..:|||
Zfish   131 ENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEAKSGDLEE 195

  Fly   196 ELKVVGNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRAEHAEKQVKRLQKEVDRLEDEL 260
            |||.|.|:|||||...||.:.:.::::.|::.|:.||||||.|||.||:.|.:|:|.:|.||||:
Zfish   196 ELKNVTNNLKSLEAQAEKYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEV 260

  Fly   261 GINKDRYKSLADEMD 275
            ...|.:.|:|::|:|
Zfish   261 YAQKLKGKALSEELD 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_001262592.1 Tropomyosin 48..281 CDD:395200 108/228 (47%)
tpm2NP_001002119.1 Tropomyosin 48..282 CDD:395200 108/228 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581559
Domainoid 1 1.000 245 1.000 Domainoid score I2136
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48449
OrthoDB 1 1.010 - - D1576041at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6508
orthoMCL 1 0.900 - - OOG6_101961
Panther 1 1.100 - - O PTHR19269
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X463
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.860

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