DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm2 and tpm4b

DIOPT Version :9

Sequence 1:NP_001262592.1 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_017213161.1 Gene:tpm4b / 324244 ZFINID:ZDB-GENE-030131-2964 Length:284 Species:Danio rerio


Alignment Length:281 Identity:129/281 - (45%)
Similarity:188/281 - (66%) Gaps:0/281 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAIKKKMQAMKLEKDNAIDKADTCENQAKDANSRADKLNEEVRDLEKKFVQVEIDLVTAKEQLE 65
            |:|||||||.:||:|:||||:|:..|:..|.|..:..:|.:|:..|:||....|.:|....|.|:
Zfish     1 MEAIKKKMQMLKLDKENAIDRAEQAESDKKAAEDKCKQLEDELLGLQKKLKATEDELDKYSEALK 65

  Fly    66 KANTELEEKEKLLTATESEVATQNRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVL 130
            .|..:||..||..:..|.:||..||::|.:||:|::::||..||.|||.||.::|||:.|..||:
Zfish    66 DAQEKLELSEKKASDAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGIKVI 130

  Fly   131 ENRSQQDEERMDQLTNQLKEARMLAEDADTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELEE 195
            |||:.:|||:|:....|||||:.:|||:|.|.:||:|||..:|.|||.||:|....|.|..:|||
Zfish   131 ENRAMKDEEKMEIQEIQLKEAKHIAEDSDRKYEEVARKLVILEGELERAEERAEIAELKGGDLEE 195

  Fly   196 ELKVVGNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRAEHAEKQVKRLQKEVDRLEDEL 260
            |||.|.|:|||||...||.:::.::::.|:|.|:.||||.|.|||.||:.|.:|:|.:|.||:.|
Zfish   196 ELKNVTNNLKSLEAQSEKYSEKEDKYEDEIKVLTDKLKEVETRAEFAERTVAKLEKTIDDLEESL 260

  Fly   261 GINKDRYKSLADEMDSTFAEL 281
            |..|.:...:...:|.|..||
Zfish   261 GEAKQQNLEMHQVLDQTLQEL 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_001262592.1 Tropomyosin 48..281 CDD:395200 105/232 (45%)
tpm4bXP_017213161.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581565
Domainoid 1 1.000 245 1.000 Domainoid score I2136
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48449
OrthoDB 1 1.010 - - D1576041at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6508
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19269
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X463
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.960

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