DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tm2 and Tpm1

DIOPT Version :9

Sequence 1:NP_001262592.1 Gene:Tm2 / 41853 FlyBaseID:FBgn0004117 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_030100101.1 Gene:Tpm1 / 22003 MGIID:98809 Length:326 Species:Mus musculus


Alignment Length:323 Identity:136/323 - (42%)
Similarity:195/323 - (60%) Gaps:42/323 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAIKKKMQAMKLEKDNAIDKADTCENQAKDANSRADKLNEEV-------------RD------- 45
            |||||||||.:||:|:||:|:|:..|...|.|..|:.:|.|::             ||       
Mouse     1 MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEEDIAAKEKLLRASEDERDRVLEELH 65

  Fly    46 ----------------------LEKKFVQVEIDLVTAKEQLEKANTELEEKEKLLTATESEVATQ 88
                                  |:||....|.:|....|.|:.|..:||..||..|..|::||:.
Mouse    66 KAEDSLLAADETAAKLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASL 130

  Fly    89 NRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVLENRSQQDEERMDQLTNQLKEARM 153
            ||::|.:||:|::::||..||.|||.||.::|||:.|..||:|:|:|:|||:|:....|||||:.
Mouse   131 NRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKH 195

  Fly   154 LAEDADTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELEEELKVVGNSLKSLEVSEEKANQRV 218
            :|||||.|.:||:|||..:|.:||.||:|....|.|..|||||||.|.|:|||||...||.:|:.
Mouse   196 IAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKE 260

  Fly   219 EEFKREMKTLSIKLKEAEQRAEHAEKQVKRLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 281
            ::::.|:|.||.||||||.|||.||:.|.:|:|.:|.||:::...|:...|:...:|.|..||
Mouse   261 DKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLEL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm2NP_001262592.1 Tropomyosin 48..281 CDD:395200 109/232 (47%)
Tpm1XP_030100101.1 PRK12472 <18..>127 CDD:237110 25/108 (23%)
Tropomyosin 90..324 CDD:395200 111/234 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837804
Domainoid 1 1.000 248 1.000 Domainoid score I2128
eggNOG 1 0.900 - - E1_KOG1003
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48449
OrthoDB 1 1.010 - - D1576041at2759
OrthoFinder 1 1.000 - - FOG0002679
OrthoInspector 1 1.000 - - mtm8688
orthoMCL 1 0.900 - - OOG6_101961
Panther 1 1.100 - - O PTHR19269
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X463
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.720

Return to query results.
Submit another query.