DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm1 and TPM1

DIOPT Version :10

Sequence 1:NP_732006.2 Gene:Tm1 / 41852 FlyBaseID:FBgn0003721 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_014320.1 Gene:TPM1 / 855645 SGDID:S000005023 Length:199 Species:Saccharomyces cerevisiae


Alignment Length:218 Identity:52/218 - (23%)
Similarity:101/218 - (46%) Gaps:49/218 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   492 IRNELHNI----------------MNTQLKR----AESEVAALNRRIQLLEEDLERSEERLGSAT 536
            ||.:|.|:                .|..|::    .|:::.:|..:.|.||:::|:.|  .|.:.
Yeast     4 IREKLSNLKLEAESWQEKYEELKEKNKDLEQENVEKENQIKSLTVKNQQLEDEIEKLE--AGLSD 66

  Fly   537 AKLSEASQAADESERARKILENRALADEERMDALENQLKEARFLAEEA---DKKYDEVARKLAMV 598
            :|.:|......|::.....::|..|  ||.::.||.:|.|::.|:|::   ....|..::|...:
Yeast    67 SKQTEQDNVEKENQIKSLTVKNHQL--EEEIEKLEAELAESKQLSEDSHHLQSNNDNFSKKNQQL 129

  Fly   599 EADLERAEERAEQGENKIVELEEELRVVGNNLKSLEVSEEKA---NQREE-EYKNQIKTLNTRLK 659
            |.||       |:.:.|:.|..|:||  .::||:.::....|   .|||| |.||:         
Yeast   130 EEDL-------EESDTKLKETTEKLR--ESDLKADQLERRVAALEEQREEWERKNE--------- 176

  Fly   660 EAEARAEFAERSVQKLQKEVDRL 682
            |...:.|.|::.:.::...::.|
Yeast   177 ELTVKYEDAKKELDEIAASLENL 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm1NP_732006.2 Tropomyosin_1 7..>85 CDD:403808
Tropomyosin 507..708 CDD:459736 46/183 (25%)
TPM1NP_014320.1 Tropomyosin_1 7..186 CDD:403808 48/200 (24%)
Blue background indicates that the domain is not in the aligned region.

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