DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Tm1 and AT5G14540

DIOPT Version :9

Sequence 1:	NP_732006.2	Gene:	Tm1 / 41852	FlyBaseID:	FBgn0003721	Length:	711	Species:	Drosophila melanogaster
Sequence 2:	NP_196958.2	Gene:	AT5G14540 / 831305	AraportID:	AT5G14540	Length:	547	Species:	Arabidopsis thaliana

Alignment Length:	449	Identity:	88/449 - (19%)
Similarity:	146/449 - (32%)	Gaps:	102/449 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MDAIKKKMQAMKVDKDGALERALVCEQEARDANTRA---------EKAEEEARQLQKKIQTVENE 56
            ||:::......:.|::.. |.|::   .|.|...:|         |.......||:.:.:.:||.
plant   105 MDSLEPSKLFAEKDRNSP-ESAII---SAIDRTMKAHADKLLHVMEGVSARLTQLETRTRDLENL 165

  Fly    57 LDQTQEALTLVTGKLEEKNKALQNESISRTFGI-VSKRSQQVKRLENLSLGVDPQEKTQVQPQSG 120
            :|..:.::....||.:.|.:.|:|..:....|: :.|..|::...: |.|......|...||::.
plant   166 VDDVKVSVGNSHGKTDGKLRQLENIMLEVQNGVQLLKDKQEIVEAQ-LQLSKLQLSKVNQQPETH 229

  Fly   121 KTVAKPKQRQQKQLFK--SDKAKEKSSRQQRKRAGTRSTRNPRTQSESSGLSSRWCSIEEQLNLL 183
            .|..:|..:....|.:  :..|...|..||    |....:..:..:...|||
plant   230 STHVEPTAQPPASLPQPPASAAAPPSLTQQ----GLPPQQFIQPPASQHGLS------------- 277

  Fly   184 DDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFWSDSDMEHDDSSTSGTGSHTASNTSLVP 248
                     ...|.|.||..:|         ||..:.:                 ...|..|..|
plant   278 ---------PPSLQLPQLPNQF---------SPQQEPY-----------------FPPSGQSQPP 307

  Fly   249 ASLKRRGHQHHPRFSGTRRPNVPNVQEILAALYRGDSKSALSNLRGETQPEEEQPQQQTEEVLPP 313
            .:::.......|..|..:.|..|..|:   ..|.......|.:..|....|...|||.    .||
plant   308 PTIQPPYQPPPPTQSLHQPPYQPPPQQ---PQYPQQPPPQLQHPSGYNPEEPPYPQQS----YPP 365

  Fly   314 S--RSTLSLPLSESVTNSLGSNSPTPTDESSVQDEGA-SNPA--AALIAED---AAPPAGTTTSK 370
            :  |...|.|...|..:....|:| ||..|.....|. ||..  :....|.   ..||:....:.
plant   366 NPPRQPPSHPPPGSAPSQQYYNAP-PTPPSMYDGPGGRSNSGFPSGYSPESYPYTGPPSQYGNTP 429

  Fly   371 SKKKKREKGERSEKSDKSEKSDRKKKSSGKKERSKRSNPMEQSSDSLATDLSAGAIDEG 429
            |.|...:.|                ..||...:...:.|:.|.. .:|:.:|:|....|
plant   430 SVKPTHQSG----------------SGSGAYPQLPMARPLPQGL-PMASAISSGGSGGG 471

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Tm1	NP_732006.2	Tropomyosin_1	7..>85	CDD:289488	17/86 (20%)
Tm1	NP_732006.2	Tropomyosin_1	517..648	CDD:289488
AT5G14540	NP_196958.2	DUF1421	191..518	CDD:284607	69/359 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000