DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm1 and Tpm1

DIOPT Version :10

Sequence 1:NP_732006.2 Gene:Tm1 / 41852 FlyBaseID:FBgn0003721 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_063121000.1 Gene:Tpm1 / 24851 RGDID:3898 Length:326 Species:Rattus norvegicus


Alignment Length:348 Identity:146/348 - (41%)
Similarity:213/348 - (61%) Gaps:42/348 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 KKKKREKGERSEKSDKSEKSDRKKKSSGKKERSKRSNPMEQSSDSLATDLSAGAIDEGIALADDD 436
            ||.:..|.::....|::|:::..||::  ::|||:          |..|:||   .|.:..|.:|
  Rat     6 KKMQMLKLDKENALDRAEQAEADKKAA--EDRSKQ----------LEEDISA---KEKLLRASED 55

  Fly   437 DN-------QAAEWSKLRCTSEAAEIVAEREA--RRNKGRCADYPGLAFGRSIFSSDTMMKFNII 492
            :.       ..||.|.|.....||::..|..:  ::.||               :.|.:.|::..
  Rat    56 ERDRVLEELHKAEDSLLAADETAAKLEDELVSLQKKLKG---------------TEDELDKYSEA 105

  Fly   493 RNELHNIMNTQLKR---AESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQAADESERARK 554
            ..:....:....|:   ||::||:|||||||:||:|:|::|||.:|..||.||.:|||||||..|
  Rat   106 LKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMK 170

  Fly   555 ILENRALADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLERAEERAEQGENKIVEL 619
            ::|:||..|||:|:..|.|||||:.:||:||:||:||||||.::|:||||||||||..|.|..||
  Rat   171 VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAEL 235

  Fly   620 EEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLNTRLKEAEARAEFAERSVQKLQKEVDRLED 684
            ||||:.|.|||||||...||.:|:|::|:.:||.|:.:|||||.|||||||||.||:|.:|.||:
  Rat   236 EEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEE 300

  Fly   685 DLVLEKERYKDIGDDLDTAFVEL 707
            .:...||....:...||...:||
  Rat   301 KVAHAKEENLSMHQMLDQTLLEL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm1NP_732006.2 Tropomyosin_1 7..>85 CDD:403808
Tropomyosin 507..708 CDD:459736 117/201 (58%)
Tpm1XP_063121000.1 None
Blue background indicates that the domain is not in the aligned region.

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