DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tm1 and Tpm1

DIOPT Version :9

Sequence 1:NP_732006.2 Gene:Tm1 / 41852 FlyBaseID:FBgn0003721 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_030100101.1 Gene:Tpm1 / 22003 MGIID:98809 Length:326 Species:Mus musculus


Alignment Length:348 Identity:145/348 - (41%)
Similarity:213/348 - (61%) Gaps:42/348 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 KKKKREKGERSEKSDKSEKSDRKKKSSGKKERSKRSNPMEQSSDSLATDLSAGAIDEGIALADDD 436
            ||.:..|.::....|::|:::..||::  ::|||:          |..|::|   .|.:..|.:|
Mouse     6 KKMQMLKLDKENALDRAEQAEADKKAA--EDRSKQ----------LEEDIAA---KEKLLRASED 55

  Fly   437 DN-------QAAEWSKLRCTSEAAEIVAEREA--RRNKGRCADYPGLAFGRSIFSSDTMMKFNII 492
            :.       ..||.|.|.....||::..|..:  ::.||               :.|.:.|::..
Mouse    56 ERDRVLEELHKAEDSLLAADETAAKLEDELVSLQKKLKG---------------TEDELDKYSEA 105

  Fly   493 RNELHNIMNTQLKR---AESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQAADESERARK 554
            ..:....:....|:   ||::||:|||||||:||:|:|::|||.:|..||.||.:|||||||..|
Mouse   106 LKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMK 170

  Fly   555 ILENRALADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLERAEERAEQGENKIVEL 619
            ::|:||..|||:|:..|.|||||:.:||:||:||:||||||.::|:||||||||||..|.|..||
Mouse   171 VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAEL 235

  Fly   620 EEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLNTRLKEAEARAEFAERSVQKLQKEVDRLED 684
            ||||:.|.|||||||...||.:|:|::|:.:||.|:.:|||||.|||||||||.||:|.:|.||:
Mouse   236 EEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEE 300

  Fly   685 DLVLEKERYKDIGDDLDTAFVEL 707
            .:...||....:...||...:||
Mouse   301 KVAHAKEENLSMHQMLDQTLLEL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tm1NP_732006.2 Tropomyosin_1 7..>85 CDD:289488
Tropomyosin_1 517..648 CDD:289488 80/130 (62%)
Tpm1XP_030100101.1 PRK12472 <18..>127 CDD:237110 27/138 (20%)
Tropomyosin 90..324 CDD:395200 122/249 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837803
Domainoid 1 1.000 248 1.000 Domainoid score I2128
eggNOG 1 0.900 - - E1_KOG1003
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 301 1.000 Inparanoid score I2662
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576041at2759
OrthoFinder 1 1.000 - - FOG0002679
OrthoInspector 1 1.000 - - mtm8688
orthoMCL 1 0.900 - - OOG6_101961
Panther 1 1.100 - - O PTHR19269
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2857
SonicParanoid 1 1.000 - - X463
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

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