DRSC/TRiP Functional Genomics Resources

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Protein Alignment MRG15 and Arid4b

DIOPT Version :9

Sequence 1:NP_001262588.1 Gene:MRG15 / 41850 FlyBaseID:FBgn0027378 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_919238.1 Gene:Arid4b / 94246 MGIID:2137512 Length:1314 Species:Mus musculus


Alignment Length:494 Identity:93/494 - (18%)
Similarity:156/494 - (31%) Gaps:198/494 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPENRVLKYNDDNV---KRRQELARQCGERSKK 97
            :|||.:..:..:.....|.:||.||:..:|||:..:::::..|.||   |.|:::..:..:...:
Mouse   587 MYEASIKDSDVEGGEALYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDR 651

  Fly    98 DNKKGVYIPGSAKAKKMEQMRNESRAS---------TPSKDSNT-----------------SQST 136
            |.|   |.|.:.|.:::.:...:|..|         ..:|:|:|                 |:|:
Mouse   652 DEK---YSPKNCKLRRLSKSPFQSNPSPEMVSKLDLADAKNSDTAHIKSIEITSILNGLQASESS 713

  Fly   137 A---------------------------------------SSTP----------------TTSAG 146
            |                                       .|:|                |.|..
Mouse   714 AEDSEQEDERCTQDVDNIGKDESKVEHSTHSRNELISKEEQSSPSLLEENKVHTDLVIAKTVSKS 778

  Fly   147 P---GSKSEAGSTGT-----------------TTTNSTANSTTSRAHRK--STQSTPSTARPGTP 189
            |   ....||.|..|                 .||:......|.|..|:  |......|..||..
Mouse   779 PERLRKDMEAISEDTDFEEEDEITKKRKDVKKDTTDKALKPQTKRGKRRYCSADECLQTGSPGKK 843

  Fly   190 SD--KKEDPAAAETT--------EEE---GPVAPKKK--RMSEQRPSL------TG-SDVAEKPL 232
            .|  |.::|...|.:        |||   ..:.|.||  .:.|:|.||      :| |:||||.:
Mouse   844 EDRTKSKEPLCTENSSNSSSDEDEEEKSKAKMTPTKKYNGLEEKRKSLRTTSFYSGFSEVAEKRI 908

  Fly   233 ------------------------------------------------PPTTTPSTPTTEP---- 245
                                                            ||...|.....|.    
Mouse   909 KLLNNSDERLQNNRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAPDEGAVEESLQT 973

  Fly   246 -------APCVESEEAYAAKVEVK------IKIPDELKHYLTDDWYAVVREHKLL-ELPAKVTVQ 296
                   :|.:|.|:...|.|:.|      :::.|....:.:....:|:...... |.|:.||:.
Mouse   974 VAEEESCSPIMELEKPLPASVDNKPIEEKPLEVSDRKTEFPSSGSNSVLNTPPTTPESPSSVTIT 1038

  Fly   297 QISEQYLAHKKSVKSTSASKEV-AINDVLDGIVEYFNVM 334
            :.|:|..:...||......:|| :|....|..:|..:|:
Mouse  1039 EASQQQSSVTVSVPLPPNQEEVRSIKSETDSTIEVDSVV 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRG15NP_001262588.1 Tudor-knot 22..75 CDD:288553 11/38 (29%)
MRG 249..415 CDD:283390 21/94 (22%)
Arid4bNP_919238.1 TUDOR 58..113 CDD:197660
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..169
RBB1NT 168..263 CDD:369729
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..306
ARID_ARID4B 308..399 CDD:350647
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..577
CD_CSD 573..630 CDD:391946 11/42 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 635..678 9/45 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..888 32/178 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 943..1215 26/135 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1256..1290
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3001
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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