DRSC/TRiP Functional Genomics Resources

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Protein Alignment MRG15 and Arid4a

DIOPT Version :10

Sequence 1:NP_001262588.1 Gene:MRG15 / 41850 FlyBaseID:FBgn0027378 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_036013289.1 Gene:Arid4a / 238247 MGIID:2444354 Length:1283 Species:Mus musculus


Alignment Length:46 Identity:12/46 - (26%)
Similarity:15/46 - (32%) Gaps:25/46 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EPDKSYPLPP---------------------LSHITTQPEWTTGQN 43
            || ||.|.||                     :.||.   ||..|::
Mouse   335 EP-KSVPAPPPVAQSSKVEVIIQERKDSKPGVPHIR---EWDRGKD 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRG15NP_001262588.1 CBD_MSL3_like 26..82 CDD:350846 7/39 (18%)
MRG 250..419 CDD:461721
Arid4aXP_036013289.1 Tudor_ARID4A_rpt1 4..61 CDD:410530
Tudor_SF 62..118 CDD:470623
RBB1NT 170..262 CDD:462390
ARID_ARID4A 312..397 CDD:350646 12/46 (26%)
CBD_RBP1_like 580..638 CDD:350843
Blue background indicates that the domain is not in the aligned region.

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