DRSC/TRiP Functional Genomics Resources

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Protein Alignment MRG15 and mrg-1

DIOPT Version :9

Sequence 1:NP_001262588.1 Gene:MRG15 / 41850 FlyBaseID:FBgn0027378 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001122727.1 Gene:mrg-1 / 176702 WormBaseID:WBGene00003406 Length:337 Species:Caenorhabditis elegans


Alignment Length:453 Identity:99/453 - (21%)
Similarity:158/453 - (34%) Gaps:179/453 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FVDGERVLCFHGPLIYEAKV--LKTKPDATPVEYYIHYAGWSKNWDEWVP----ENRVLKYNDDN 80
            |..||.|.|.:....|:||:  :||..|...: |.:|:.||:..:||.:|    ::|:.|     
 Worm     7 FEVGENVACIYKGKPYDAKITDIKTNSDGKEL-YCVHFKGWNNRYDEKIPVGEEKDRIFK----- 65

  Fly    81 VKRRQELARQCGERSKKDNKKGVYIPGSAKAKKMEQMRNESRASTPSKDSNTSQSTASSTPTTSA 145
                                      |:|                    |..::...:..|||:.
 Worm    66 --------------------------GTA--------------------SEYAEKHNAELPTTAL 84

  Fly   146 GPGSKSEAGSTGTTTTNSTANSTTSRAHRKSTQSTPSTARPGTPSDKKEDPAAAETTEEEGPVAP 210
            .|..||.|                :.|.|.....||.|::                        .
 Worm    85 KPKKKSLA----------------AEAPRDDRDDTPGTSK------------------------G 109

  Fly   211 KKKRMSEQRPSLTGSDVAEKPLPPTTTPSTPTTEPAPCVESEEAYAAKVEVKIKIPDELKHYLTD 275
            ||.:.....|.:|..|                                  :|:::|..|:..|.|
 Worm   110 KKAKSVTIAPVMTADD----------------------------------MKVELPKPLRKILID 140

  Fly   276 DWYAVVREHKLLELPAKVTVQQISEQYLAHKKSVKSTSASKEV--AINDVL-------------- 324
            | |.:|..:.:..:|.:.:|.||.|.|      :|:...|.|.  .::|:|              
 Worm   141 D-YDLVCRYFINIVPHEYSVDQIIEDY------IKTIPVSNEQMRTVDDLLIEYEEADIKITNLA 198

  Fly   325 -----DGIVEYFNVMLGS--QLLYKFERTQYADVMQKHP---------DTPL-------SELYGS 366
                 .|:|:||||.|||  ||||||||.||.|:::|..         .|.|       |:.||.
 Worm   199 LICTARGLVDYFNVTLGSSYQLLYKFERPQYNDLVKKRAMEKGIDITNPTALQDSGFRPSQEYGI 263

  Fly   367 FHLLRLFVRLGSMLSYSALDQQSMQNLLTHVQDFLKFLVKNSSIFF-SMSNFINVDPEYVRNA 428
            .|.||:..:|...|..:..:...:..::..|.|.:.||.||...:: ..|::.....:|.|.:
 Worm   264 VHFLRMLAKLPDYLKLTQWNDHVINRIMIGVHDLIVFLNKNHGKYYRGSSDYQGASNDYYRRS 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRG15NP_001262588.1 Tudor-knot 22..75 CDD:288553 19/58 (33%)
MRG 249..415 CDD:283390 56/205 (27%)
mrg-1NP_001122727.1 CD_CSD <19..63 CDD:421697 13/44 (30%)
MRG 125..316 CDD:399022 58/231 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I6471
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 73 1.000 Inparanoid score I3886
Isobase 1 0.950 - 0 Normalized mean entropy S2268
OMA 1 1.010 - - QHG55560
OrthoDB 1 1.010 - - D1624495at2759
OrthoFinder 1 1.000 - - FOG0002343
OrthoInspector 1 1.000 - - otm14408
orthoMCL 1 0.900 - - OOG6_102009
Panther 1 1.100 - - LDO PTHR10880
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R362
SonicParanoid 1 1.000 - - X1774
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.960

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