DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4338 and AT5G10070

DIOPT Version :10

Sequence 1:NP_650441.1 Gene:CG4338 / 41849 FlyBaseID:FBgn0038313 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_974761.1 Gene:AT5G10070 / 830871 AraportID:AT5G10070 Length:266 Species:Arabidopsis thaliana


Alignment Length:231 Identity:109/231 - (47%)
Similarity:149/231 - (64%) Gaps:2/231 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ASSSSSENESSDSESSG-DGAQNDLGQPPEFAVAMWDLNHCDPKKCSGRKLARLGLISNLRLGQK 101
            :|...::|.:.:.||.. |....|....|:..:||||...||.|:|:||||||..|:..||:...
plant    14 SSRGRTDNLAREDESLPLDQEPEDEAPVPKVQLAMWDFGQCDAKRCTGRKLARFNLLKELRVNTG 78

  Fly   102 FPGLVLSPVGQLCVSPLDRDVVASSGVAVIDCSWAKLDETPFGRMRSPHPRLLPFLVAANPINYG 166
            |.|:||||||:.|||..|.|::...|:||:|||||:|.:.||.::|...|||||:||||||:|||
plant    79 FGGVVLSPVGRQCVSREDYDLIKRKGLAVVDCSWARLTDVPFAKLRCTAPRLLPWLVAANPVNYG 143

  Fly   167 KPCKLSCVEAIAATLYICGFTEEARWFLGKFSWGHAFLELNDKLLNAYAACKSSDEIVKVQNEYL 231
            :||:||||||::|.|.:||..|.|...||||.||||||.||..:|..|:.|::|.||:.|||.:|
plant   144 RPCELSCVEALSAALILCGEKETAELLLGKFKWGHAFLSLNKDILKEYSKCENSAEIISVQNSWL 208

  Fly   232 EKEQQERDKPRDLRDFYPTSSSSSSSETETEGDDED 267
            .::.|...:|..|.:.........|.: |:|.||||
plant   209 TQQTQIPKQPPALEERKDVKKDGESGD-ESEEDDED 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4338NP_650441.1 RLI 69..101 CDD:427689 17/31 (55%)
Ribo_biogen_C 105..231 CDD:461139 72/125 (58%)
AT5G10070NP_974761.1 RLI 44..75 CDD:427689 16/30 (53%)
Ribo_biogen_C 82..208 CDD:461139 72/125 (58%)

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