DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4338 and Tsr3

DIOPT Version :9

Sequence 1:NP_650441.1 Gene:CG4338 / 41849 FlyBaseID:FBgn0038313 Length:274 Species:Drosophila melanogaster
Sequence 2:XP_006246058.1 Gene:Tsr3 / 360494 RGDID:1565744 Length:324 Species:Rattus norvegicus


Alignment Length:292 Identity:136/292 - (46%)
Similarity:179/292 - (61%) Gaps:41/292 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GRNR-GKGKKGGGG-----PYRNVKANHNCARSFAQQANELASSSSSENESSDSESSGDGAQNDL 61
            ||.: .:|.|..||     |.|::.|       ||::.. .|..:|.:.|.::::|..|.|....
  Rat     2 GRKKVARGSKTEGGRVRRPPGRSLDA-------FAEEVG-AALRASVQTEEAENQSGPDPAALPC 58

  Fly    62 GQPPEFAVAMWDLNHCDPKKCSGRKLARLGLISNLRLGQKFPGLVLSPVGQLCVSPLDRDVVASS 126
                  |:|||:|.|||||:|:|||||||||:..|||.|:|.||||||||...|||.||.:||.|
  Rat    59 ------ALAMWELGHCDPKRCTGRKLARLGLVRCLRLSQRFGGLVLSPVGTQYVSPADRQLVAQS 117

  Fly   127 GVAVIDCSWAKLDETPFGRMRSPHPRLLPFLVAANPINYGKPCKLSCVEAIAATLYICGFTEEAR 191
            |:||||||||||||||||:||..|.||||:||||||:|||:|||||||||.||...|.||::.|.
  Rat   118 GIAVIDCSWAKLDETPFGKMRGSHLRLLPYLVAANPVNYGRPCKLSCVEAFAAAFCIVGFSDLAV 182

  Fly   192 WFLGKFSWGHAFLELNDKLLNAYAACKSSDEIVKVQNEYL----EKEQQERDKPRDL---RDF-- 247
            ..|.||.||..||:||.:||:.||||...:|:::.:..||    :..::|...|.|:   |:|  
  Rat   183 ILLRKFKWGKGFLDLNRQLLDKYAACCGPEEVLEAEQGYLASTKDTPEEENIDPFDVDSGREFAN 247

  Fly   248 --YPTSSS----------SSSSETETEGDDED 267
              .|.:|:          .|...:|..|:|.|
  Rat   248 LNRPVASTRLPMDTDDTDESEDHSEDSGEDSD 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4338NP_650441.1 Tsr3 69..233 CDD:224953 106/167 (63%)
RLI 69..101 CDD:281988 22/31 (71%)
DUF367 105..229 CDD:281963 79/123 (64%)
Tsr3XP_006246058.1 RLI 60..92 CDD:281988 22/31 (71%)
PRK02287 65..223 CDD:235024 102/157 (65%)
DUF367 96..219 CDD:281963 79/122 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335375
Domainoid 1 1.000 170 1.000 Domainoid score I3692
eggNOG 1 0.900 - - E1_COG2042
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6922
Inparanoid 1 1.050 228 1.000 Inparanoid score I3389
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222562at2759
OrthoFinder 1 1.000 - - FOG0004488
OrthoInspector 1 1.000 - - oto98254
orthoMCL 1 0.900 - - OOG6_101679
Panther 1 1.100 - - LDO PTHR20426
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3182
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.800

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