Protein Alignment Cp190 and SYD

DIOPT Version :10

• Sequence 1: NP_524359.2
• Gene: Cp190 / 41848
• FlyBaseID: FBgn0000283
• Length: 1096
• Species: Drosophila melanogaster
• Sequence 2: NP_001325348.1
• Gene: SYD / 817375
• AraportID: AT2G28290
• Length: 3575
• Species: Arabidopsis thaliana
• Alignment Length: 1189
• Identity: 234/1189 - (19%)
• Similarity: 404/1189 - (33%)
• Gaps: 298/1189 - (25%)

  Fly    56 FNVLEQTCEIVDDALIMPNEFQADVVVPIVNFMYTGTLEFELKMYGKLLRTAKEMNMTVLLKLLE 120
            :..|:.......||.:..:...:|..:|:.:.....|:|            |:|.|:..|...|.
plant  1715 YTALQGVTTAPSDATLPMSSQPSDATLPMSSQPVGSTVE------------AQEANVPSLPAALP 1767

  Fly   121 AHRRTMENVNRQQRPPSPKGIRRRTVGQ--PSSGLPQQRVLGPSPQ------------------- 164
            |.|| :.|:..:...|..:|.||   ||  |::.....|..|.:||
plant  1768 AKRR-VRNLPSRGETPKRQGKRR---GQPLPATDASSARSTGLTPQIEVKVGNLSGTKAKFDAVA 1828

  Fly   165 ------SRNVATPIAQRANTQRGSTGNTMSRT---SGGSNRSPYGDSSNVKQEPTSPFEQLRKGY 220
                  |::||..|     ...||....:.|.   :|||.|....|.::|.:.....|.:.....
plant  1829 KEQPHFSQSVAPDI-----HSSGSLSQEIRRDTSGTGGSARKQTADVTDVARVMKEIFSETSLLK 1888

  Fly   221 NNNKRPAQTSLLS-PPSKKP---SLEEVKEF-AEQQRMRKQIAAEYG---------------DND 265
            :....|:.|:..: |.::.|   :|..|:.. ||.....|...|.|.               ..|
plant  1889 HKVGEPSATTRTNVPDAQSPGEMNLHTVETHKAEDSSGLKNQEALYNLSKADKLVSDIPHPVPGD 1953

  Fly   266 PEYDGGMLYDDVHAGDDD---DDDMPPQPSTSKQQSPQGTQTQLEHGSTTIILKQDSPSQTPTII 327
            ....|.:...||..|...   ::::...|......|    ..||..|:|               :
plant  1954 LTTSGSVANKDVDIGSSKVAAENELVKIPGGDVDSS----VIQLSLGNT---------------L 1999

  Fly   328 VKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIKLKIMPNTPAAPTE--------KSAPATVKPPA 384
            ...||..|....:::.|.|.|     :|.         .|||:..|        .|:.:.|:...
plant  2000 TAKSSLEKCTADQLLGEKLSQ-----EGE---------TTPASDGETCHLAEETASSLSYVRSEP 2050

  Fly   385 NQSSATTS---PHKKL--HVSFK-------ADKSTPLITAQQKAASSQQKSGTSQTTGNQGTGAN 437
            ..|::||:   |..||  ::||:       .||...::.:.::..:...|..|
plant  2051 TASASTTAEPLPTDKLEKNISFQDEVKTLNGDKREAILLSSEEQTNVNSKIET------------ 2103

  Fly   438 PPANTAAAQKRRIDSKTMHALIAQGAENTTGPWLCLRCGVNGRPISIPSY---RGFRRHLINTHK 499
               |:...|..|.| :..|                    |:|:.:.:.:.   ....:|.:....
plant  2104 ---NSEELQASRTD-EVPH--------------------VDGKSVDVANQTVKEDEAKHSVEIQS 2144

  Fly   500 ETIDPALCEHCGWRSVNNRELHFHMYMEHQTKSLLYTFAECA--LCNQSY---RTKGELEAHINE 559
            ..::|....:.|.:..::.:|.         ..:|.|..|.|  |.::.|   ....::|....|
plant  2145 SMLEPDELPNAGQKGHSSIDLQ---------PLVLVTSNENAMSLDDKDYDPISKSADIEQDPEE 2200

  Fly   560 -----------VHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDGII-DETDEEFLGSQD 612
                       |.|.|.:.:     ...:.:|.:...::|..||:.|:..|. |:.|.|    ||
plant  2201 SVFVQGVGRPKVGTADTQME-----DTNDAKLLVGCSVESEEKEKTLQSLIPGDDADTE----QD 2256

  Fly   613 EEEEAE------GDEEQEPEQTGKVRILSDISLPATSAITVQQAQQEQLQ------EEDVEQVQQ 665
            .||...      |....:.|.|.:.::|...|:.:       :.:::.||      :.|.|:..:
plant  2257 PEESVSDQRPKVGSAYTQMEDTDEAKLLMGCSVES-------EEKEKTLQSHIPGDDADTEKNPE 2314

  Fly   666 E-VKFVGADGNEVELTDEQRKEILSQLNQQQAGATAGGVVMVLSEPEAEHVKQETDEKSLAGTEE 729
            | |...|.|..:|..||.|.::      ...|....|..|       |...|::|.:..:.|  :
plant  2315 ESVSVQGVDRPKVGTTDTQMED------TNDAKLLVGCSV-------ASEEKEKTLQSHIPG--D 2364

  Fly   730 EYDDSQIYSELGAADSVESAKKNIADESKESIDNLEWAENLIAESEEQSNKEPKSDKPRDDISEK 794
            :.|..|...|..:...|...|...|:...|..|..:.......||||: .|..:|..|.||...:
plant  2365 DADTEQNPEESVSVQGVNRPKVGNANTQMEDTDEAKVLVGCSVESEEK-EKTLQSHIPGDDADTE 2428

  Fly   795 LK--------ELTGDWTEDENDDDVDDKPATAELASELANKDPEPTVHEEEDDI----------- 840
            ..        :...|.|.|.:.:|:||.......:.|...|:.....|...||.
plant  2429 QNPEESVSNFDRPKDGTADTHMEDIDDAKLLVGCSVESEEKEKSLQSHMPSDDAVLHAPFENTKD 2493

  Fly   841 ----DLALQSLHKGPEEATEEKASEESVTSADDAVDAVPNINSQPEKMDVDSEAADEKASKAEV- 900
                ||..:||...|.....|:...||.|.|......:...|...|.|   |:......|..:|
plant  2494 SKGDDLHGESLVSCPTMEVMEQKGFESETHARTDSGGIDRGNEVSENM---SDGVKMNISSVQVP 2555

  Fly   901 QIKKEAELENDQ----------EEFIKEDSPIPHSDSVAELREAVTASEGEDDVHLEADNIRKEL 955
            ....:..:..||          .|.::|:..:|.|...|.....:..|||    ||....:..::
plant  2556 DASHDLNVSQDQTDIPLVGGIDPEHVQENVDVPASPHGAAPNIVIFQSEG----HLSPSILPDDV 2616

  Fly   956 LDELIAEAEKPDQEKDIVQSEENATTEALDRSVT-DEDDLVPPTQVSTEQME--IDEPAAEKAAE 1017
            ..:|  |:...|::.:|  |.|.....:.|..|: |:.|:.|...:..|.::  :|.||:.....
plant  2617 AGQL--ESMSNDEKTNI--SSEQVPDVSHDLKVSQDQTDIPPVGGIVPENLQEIVDVPASPHGVV 2677

  Fly  1018 NNEDTRTADEKEA----VEDKPNQTQDVTTAEKPTLESAKAGD-EATSGEAASVDKVKSLISEWG 1077
            .:.....::|.::    .:|.|.|..|....:..|:::..:.| ..|||:......        .
plant  2678 PDVVVSQSEEIQSPSILPDDVPGQPDDGNCEKMDTMQNNTSIDIGITSGKTCQPSS--------S 2734

  Fly  1078 DDDEDEDENGVSAAAKEEL 1096
            ...|||:.|.:|.....|:
plant  2735 TQPEDENRNSLSHCEPSEV 2753

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cp190	NP_524359.2	BTB_POZ_CP190-like	16..125	CDD:349620	14/68 (21%)
		COG5236	<471..>594	CDD:227561	21/141 (15%)
		C2H2 Zn finger	540..568	CDD:275371	8/43 (19%)
		C2H2 Zn finger	569..586	CDD:275371	1/16 (6%)
		PTZ00121	<709..1075	CDD:173412	85/407 (21%)
SYD	NP_001325348.1	QLQ	277..310	CDD:214931
		PLN03142	604..>1216	CDD:215601
		SnAC	1282..1369	CDD:464219
		PHA03307	1491..>1819	CDD:223039	27/119 (23%)
		rne	<3168..3342	CDD:236766