DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and znf281

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_002935748.1 Gene:znf281 / 733827 XenbaseID:XB-GENE-5933312 Length:796 Species:Xenopus tropicalis


Alignment Length:762 Identity:138/762 - (18%)
Similarity:245/762 - (32%) Gaps:267/762 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 DDMPPQPSTSKQQSPQGTQTQLEHGSTTIILKQDSPSQTPTIIVKDSSNAKLNHTKIIAEVLRQY 349
            |.:||.|  ...|.|         |...:|||:: |...|            :||..:..:....
 Frog    27 DLLPPPP--GPPQLP---------GPGEMILKKE-PGSPP------------HHTDFLQGLAGIK 67

  Fly   350 PHIVKGHKNIKL------KIMPNTPAAP---------------TEKSAPATVKPPANQSSATTSP 393
            ...:..|:..:.      :|:..|...|               |||:.....:.|:|:       
 Frog    68 QEKIGEHEQYRFYGDRQAEIVEVTVGGPGLIPELGLNRELLIRTEKNGFDPTEIPSNK------- 125

  Fly   394 HKKLHVSFKADKSTPLITAQQKAASSQQKSGTSQTTGNQGTGANPPANTAAAQKRRIDSKTMHAL 458
                       |:..|.:..|:|.|.:::|.:|::.|..|..|:...|    ||           
 Frog   126 -----------KTKRLNSEAQEAKSKRRRSDSSKSVGGDGEAASLSPN----QK----------- 164

  Fly   459 IAQGAENTTGPWLCLRCGVNGRPISIPSYRGFRRH-LINTHKETIDPALCEHCGWRSVNNRELHF 522
                      |.:|..|....|    .||. .||| ||:|.:.   |..|..|....:....|..
 Frog   165 ----------PHICEHCSAAFR----SSYH-LRRHVLIHTGER---PFQCSQCNMSFIQKYLLQR 211

  Fly   523 HMYMEHQTKSLLYTFAECALCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMK 587
            |..:....|..     .|..||..:..|..:|.| ...|:.:...:|..|.:.|.:..:|.:|.:
 Frog   212 HEKIHSGEKPF-----NCDQCNMKFIQKYHMERH-KRTHSGEKPYKCDTCQQYFSRTDRLLKHKR 270

  Fly   588 SYHK---EQALEDGIIDETDEEFLGSQDEEEEAEGDEEQEPEQTGKVRILSDISLPATSAITVQQ 649
            :..:   :.:||.|..:.:.:...|:   .|.::|:......:.||.|..|              
 Frog   271 TCGETINKGSLEAGSSNPSLDNLSGN---FELSQGNSNFSGRKKGKSRNGS-------------- 318

  Fly   650 AQQEQLQEEDVEQVQQEVKFVGADGNEVELTDEQRKEILSQLNQQQAGATAGGVVMVLSEPEAE- 713
            |.::|         :..:|.     ||..||        :.||.|.   .|..|.:|.|...:. 
 Frog   319 AHKDQ---------KPSIKL-----NETHLT--------AGLNIQN---YAVDVPLVSSSSGSSG 358

  Fly   714 ----HVKQETDEKSLAGTEEEYDDSQIYSELGAADSVESAKKNIADESKESIDNLEWAENLIAES 774
                :||...........::|.||.|:.::                           :.|::.: 
 Frog   359 MDDLNVKVPKLVFKKVSRKQEKDDLQLEAQ---------------------------SSNMVIQ- 395

  Fly   775 EEQSNKEPKSDKPRDDIS----EKLKELTGDWTEDENDDDVDDKPATAELASELANKDPEPTVHE 835
                ....|||.|.|.:.    :.:..|.|..::.....:.||                      
 Frog   396 ----KLSDKSDSPLDMVGNAGVDTMNLLHGSGSKGHTSSNYDD---------------------- 434

  Fly   836 EEDDIDLALQSLHK-------GPEEA---------TEEKASEESVTSADDAVDAVPNINSQPEKM 884
                   |:|.|.|       |...|         :::...:.:|:|..|..:.:..|:||    
 Frog   435 -------AMQFLKKRRYLQAAGGNSAYAVNVGHMVSQQSVIQSAVSSVMDGDNPLTLIDSQ---- 488

  Fly   885 DVDSEAADEKASKAEVQIKKEAELENDQEEFIKED----SPIPH--SDSVAELREAVTASEGEDD 943
                              ....|::|.|::.:..|    |.:.|  ..||.......:.||...|
 Frog   489 ------------------SLNVEIKNCQDKSVIPDEVLQSILDHYTHKSVGHPDVPFSISEHHVD 535

  Fly   944 VHLEADNIRKELLDE--LIAEAEKPDQEK-DIVQSEENATTEALDRS 987
            :|...|:  .:|:.|  :.::::....:| .:.|.......:||:|:
 Frog   536 LHTTGDS--SDLVQEENVCSDSQSSHNDKASMFQEYSKYLQQALERT 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045
BTB 31..127 CDD:197585
C2H2 Zn finger 540..568 CDD:275371 7/27 (26%)
C2H2 Zn finger 569..586 CDD:275371 4/16 (25%)
znf281XP_002935748.1 PS_II_S4 <53..>134 CDD:132113 14/110 (13%)
zf-C2H2 166..188 CDD:333835 9/26 (35%)
C2H2 Zn finger 168..188 CDD:275368 9/24 (38%)
zf-H2C2_2 180..205 CDD:372612 9/28 (32%)
C2H2 Zn finger 196..216 CDD:275368 4/19 (21%)
zf-H2C2_2 209..233 CDD:372612 6/28 (21%)
C2H2 Zn finger 224..244 CDD:275368 6/20 (30%)
zf-H2C2_2 236..261 CDD:372612 6/25 (24%)
C2H2 Zn finger 252..271 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24394
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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