DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and Zbtb42

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001119774.1 Gene:Zbtb42 / 691556 RGDID:1582758 Length:420 Species:Rattus norvegicus


Alignment Length:622 Identity:118/622 - (18%)
Similarity:187/622 - (30%) Gaps:261/622 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GVFFLQKLQNFFNKTDYCDLTLQFRDNSQLKVHRLVLSACTDYFNVL--EQTCEIVDDALIMPNE 75
            ||..|.:|:........||.|:...| ::...||.||:||:.||::.  :|.....|..     .
  Rat     7 GVRLLGRLRQQRELGFLCDCTVLVGD-ARFPAHRAVLAACSVYFHLFYRDQPASSRDTV-----R 65

  Fly    76 FQADVV-VP----IVNFMYTGTLEFELKMYGKLLRTAKEMNMTVLLKLLEAHRRTMENVNRQQRP 135
            ...|:| ||    :::|||.|.|:........:|..|..::|..::|:.:...|        ::.
  Rat    66 LNGDIVTVPAFSRLLDFMYEGRLDLHSLPVEDVLAAASYLHMYDIVKVCKGRLR--------KKD 122

  Fly   136 PSPKGIRRRTVGQPSSGLPQQRVLGPSPQSRNVATPIAQRANTQRGSTGNTMSRTSGGSNRSPYG 200
            |.   :..||:|   :.||.|.   |.|.                                    
  Rat   123 PD---LETRTLG---TELPGQT---PHPL------------------------------------ 142

  Fly   201 DSSNVKQEPTSPFEQLRKGYNNNKRPAQTSLLSPPSKKPSL-----EEVKEFAEQQRMRKQIAAE 260
                    |:.|             ||... .:|.:|.|||     ..:.:|.            
  Rat   143 --------PSWP-------------PAFCQ-ATPKAKPPSLGVKAVHPLPKFG------------ 173

  Fly   261 YGDNDPEYDGGMLYDDVHAGDDDDDDMPPQPSTSKQQSPQGTQTQLEHGSTTIILKQDSPSQTPT 325
                                       ||....|::.|                           
  Rat   174 ---------------------------PPSWQVSEESS--------------------------- 184

  Fly   326 IIVKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIKLKIMPNTPAAPTEKSAPATVKPPANQSSAT 390
                                         |..::.||     |....|::.|    |...|:|..
  Rat   185 -----------------------------GALDLSLK-----PGPRPEQAHP----PCLLQTSQC 211

  Fly   391 TSPHKKLHVSFKADKSTPLITAQQKAASSQQKSGTSQTTGNQGTGANPPANTAAAQKRRIDSKTM 455
            :|..:         .:.||:.|:|.:.|.|..|.......:.     ||...:||:...::.:.:
  Rat   212 SSIQQ---------GAQPLVKAEQDSFSEQDSSSPQSADRSP-----PPVCASAARGLAVNLEPL 262

  Fly   456 HALIAQGAENTTGPWLCLRCGVNGRPISIPSYRGFRRHLI----------NTHKETIDPALCEHC 510
            |   .||    ||   ..:.|::..|:......|..|||.          :||  .:.|.|..|.
  Rat   263 H---IQG----TG---SQQLGLHAEPVVDSEDLGPGRHLCICPLCCKLFPSTH--ALQPHLSAHF 315

  Fly   511 GWR-SVNNRELHFHMYME---------HQTKSLLYTFAE------------CALCNQSYRTKGEL 553
            ..| ||..|     :..|         .:|.|..||...            |..|.:|::....|
  Rat   316 RERDSVRTR-----LSPEGAVPTCPLCSKTFSCTYTLKRHERTHSGEKPYTCVQCGKSFQYSHNL 375

  Fly   554 EAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYH 590
            ..|. .|||.:....|.:|.:.|.|...||||::.:|
  Rat   376 SRHA-VVHTREKPHACRWCERRFTQSGDLYRHVRKFH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045 28/108 (26%)
BTB 31..127 CDD:197585 27/102 (26%)
C2H2 Zn finger 540..568 CDD:275371 8/27 (30%)
C2H2 Zn finger 569..586 CDD:275371 7/16 (44%)
Zbtb42NP_001119774.1 BTB_POZ_ZBTB42 1..129 CDD:349737 33/138 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..204 10/94 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..248 9/45 (20%)
C2H2 Zn finger 294..314 CDD:275368 4/21 (19%)
COG5048 334..>388 CDD:227381 12/54 (22%)
C2H2 Zn finger 334..354 CDD:275368 4/19 (21%)
zf-H2C2_2 347..369 CDD:404364 2/21 (10%)
C2H2 Zn finger 362..382 CDD:275368 5/20 (25%)
C2H2 Zn finger 390..408 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24394
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.