DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and iws1

DIOPT Version :10

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001025690.1 Gene:iws1 / 595082 XenbaseID:XB-GENE-6458249 Length:909 Species:Xenopus tropicalis


Alignment Length:604 Identity:135/604 - (22%)
Similarity:239/604 - (39%) Gaps:152/604 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   611 QDEEEEAEGDEEQEPEQTGKVRILSDISLPATSAITVQQAQQEQLQEEDVEQVQQEVKFVGADGN 675
            |||.:.|..||..|.||.      |:...|...:.......::.....|.....:|    ||:.|
 Frog    22 QDERDSASDDEGNEREQR------SEPGSPERQSEDEHSDIEDNKHRSDSGSDNEE----GAEHN 76

  Fly   676 EVELTDEQRKEILSQLNQQQAGATAGGVVMVLSEPEAEHV--KQETDEKSLAGTEEEYDDSQIYS 738
            :.|  ||.|....|.|....|..:.       :|....|:  ..|.|.:...|::.|  .|.:..
 Frog    77 DSE--DEHRPHNSSDLENHDASDSE-------NEESRNHIASDSEDDVRRQKGSDSE--GSPVKD 130

  Fly   739 ELGAADSVESAKKNIADESKESIDNLEWA---------ENLIAESEEQSNKEPKSDKPRDDISEK 794
              .|:||.|...::.|.:|::.....|.|         :|..::||:::..:.:.....|:...|
 Frog   131 --AASDSDEEPIRHSASDSEDDGPRKEQANDSEDERHKKNTASDSEDEAPAKHQGSDSEDEAPAK 193

  Fly   795 -----------LKELTGDWTEDE------NDDDVDDKPATAELASELANKDPEPTVHEEEDDIDL 842
                       .|....| :|||      ..|..|:.|| ...||:..::.|......:.:|...
 Frog   194 HVASDSEDEAPAKRAASD-SEDEAPAKRAASDSEDEAPA-KRAASDSEDEAPAKRAASDSEDEAP 256

  Fly   843 ALQSLHKGPEEATEEKASEES------VTSADDAVDAVP-------NINSQPEKMDVDSE----- 889
            |.::.....:||..::|:.:|      ..:|.|:.|..|       :.:..|.|..|.|.     
 Frog   257 AKRAASDSEDEAPPKRAASDSEDEAPPKRAASDSEDEAPPKRAASDSEDEAPAKRKVSSSEDEAP 321

  Fly   890 -----AADEKASK-----AEVQIK-KEAELENDQEEFIKEDSPIPH--SDSVAELREAVTASEGE 941
                 :|.:|:||     :|.:.: |.|.:::|.|:   ||.|:..  |||..|......||:.|
 Frog   322 SKQAFSASKKSSKKSSGDSEDKARGKRAIIDSDDED---EDVPVKRAASDSEEETHPKGKASDSE 383

  Fly   942 DDVHLEADNIRKELLDELIAEA-------EKPDQEKDIVQSEENATTEALDR------------- 986
            |:...:......|  :|..|:|       |.|..::.||.|::  :.:.:||             
 Frog   384 DEAPSKQQPSDSE--EETPAKAAANNSEDEFPRMKRKIVSSDD--SDDEIDRKPLQKKKKKSPRR 444

  Fly   987 -SVTDEDDLV-PPTQVSTEQMEIDEPAAEKAA---ENNEDTRTAD----------------EKEA 1030
             |.:|..|.| ...:.::|..|.:|.|::|.:   .::||...|:                :.:|
 Frog   445 SSESDSSDKVDSKKRKASESDEEEEKASKKKSAILSDSEDEDAANKSGNKKSRILSDGDDSDSDA 509

  Fly  1031 VEDKPNQTQDVTTA---EKPTLES---AKAGDEATSGEAASVDKVKSLIS----EWGDDDED--- 1082
            ..|:|.|.:.:.::   |:..|:|   ||..|:....|:.|.::.::||:    |.||::|:   
 Frog   510 GSDRPKQKKKLASSDSEEEDELKSKTEAKNADKLFGSESDSGNEEENLIADIFGESGDEEEEEFT 574

  Fly  1083 -------EDENGVSAAAKE 1094
                   |.|..|::|.|:
 Frog   575 GFNQEDLEGEKTVTSANKQ 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB_POZ_CP190-like 16..125 CDD:349620
COG5236 <471..>594 CDD:227561
C2H2 Zn finger 540..568 CDD:275371
C2H2 Zn finger 569..586 CDD:275371
PTZ00121 <709..1075 CDD:173412 103/475 (22%)
iws1NP_001025690.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..615 135/604 (22%)
MSCRAMM_ClfA <8..321 CDD:468110 69/323 (21%)
2 X approximate repeats 451..530 15/78 (19%)
TFIIS_I 520..882 CDD:469629 19/74 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 786..820
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.