DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp190 and Hic2

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_849253.2 Gene:Hic2 / 58180 MGIID:1929869 Length:619 Species:Mus musculus


Alignment Length:639 Identity:129/639 - (20%)
Similarity:213/639 - (33%) Gaps:185/639 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QKLQNFFNKTDYCDLTLQFRDNSQLKVHRLVLSACTDYFN--VLEQTCEIVDDALIMPNEFQADV 80
            |:.:.|.     ||:.:.. :||..:.|:.||:|.:.||.  ||......:|..::....||   
Mouse    39 QRAKGFL-----CDVIIMV-ENSIFRAHKNVLAASSIYFKSLVLHDNLINLDTDMVSSTVFQ--- 94

  Fly    81 VVPIVNFMYTGTLEFELKMYGKLLRT--AKEMNMTVL------LKLLEAHRRTMENVNRQQRPPS 137
              .|::|:||          ||||.:  ..|.|.:.|      |:|.|........:.|..:|..
Mouse    95 --QILDFIYT----------GKLLPSDQPSEPNFSTLLTAASYLQLPELAALCRRKLKRAGKPFG 147

  Fly   138 PKGIRRRTVGQPS---------------SGLPQQRVLGPSPQSRNVATPIAQRA--------NTQ 179
            |..:....:|:|:               .||...|...|:||.    .|.|:.:        :||
Mouse   148 PGRVGTAGIGRPTRSQRLSTASVIQARFPGLVDVRKGHPAPQE----LPQAKGSDDELFLGTSTQ 208

  Fly   180 R--------GSTGNTMSRTSGGSNRSPYGDSSNVKQEPTSPFEQLRKGYNNNKRPAQTSLLSPPS 236
            .        |..|..|.  .||.:.|..|.|...:||         .|.:.:|:       |||.
Mouse   209 ESTHGLGLGGPAGGEMG--LGGCSTSTNGSSGGCEQE---------LGLDLSKK-------SPPL 255

  Fly   237 KKPSLEEVKEFAEQQRMRKQIAAEYGDNDPEYDGGMLYDDVHAGDDDDDDMPPQPSTSKQQSPQG 301
                                        .|...|      .|...:|    |.|.|.|:::||..
Mouse   256 ----------------------------PPTTPG------PHLTPED----PAQLSDSQRESPAP 282

  Fly   302 TQTQ-LEHGSTTIILKQDSPSQTPTIIVKDSSNAKLNHTKII----AEVLRQYPHIVKGHKNIKL 361
            |.|. |..|::...::..:..:.|    .|...|:.||..::    .:..:...|..:.....|.
Mouse   283 TSTSALPVGNSASFVELGATPEEP----MDVEGAEENHLSLLEGQGGQPRKSLRHSARKKDWNKK 343

  Fly   362 KIMPNTPAAPTEKSAPATVKPPANQSSATTSPHKKLHVS--------FKADKSTPLITAQQKAAS 418
            :.:..:|....|..:..:......:.:....|:..|..|        ...::|.|....::....
Mouse   344 EPVAGSPFDRRETGSKGSCPGEEGEGTGDRVPNGVLASSAGGGGPSASYGEQSFPCKEEEENGKD 408

  Fly   419 SQQKSGTSQTTGNQG-TGANPPANTAAAQKRRIDSKTMHALIAQGAENTT---GPWLCLRCGVNG 479
            ..:.||.|.:.|..| |||:                  :....:|.|..:   ..::|:.|..  
Mouse   409 GSEDSGQSGSEGGSGHTGAH------------------YVYRQEGYETVSYGDNVYVCIPCAK-- 453

  Fly   480 RPISIPSYRGFRRHLINTHKE-----TIDPALCEHCGWRSVNNRELHFHMYMEHQTKSLLYTF-- 537
               ..||......| :.||.|     ..:.|.....|.......:|        .|.|..||.  
Mouse   454 ---GFPSSEQLNAH-VETHTEEELFIKEEGAYETGSGGAEEEAEDL--------STPSAAYTADS 506

  Fly   538 --AECALCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSY 589
              .:|::|.::|:....|..| .:.|.......|..|.|:|.|...:.|||:|:
Mouse   507 RPFKCSVCEKTYKDPATLRQH-EKTHWLTRPFPCNICGKMFTQRGTMTRHMRSH 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045 30/111 (27%)
BTB 31..127 CDD:197585 28/105 (27%)
C2H2 Zn finger 540..568 CDD:275371 6/27 (22%)
C2H2 Zn finger 569..586 CDD:275371 6/16 (38%)
Hic2NP_849253.2 BTB 40..140 CDD:279045 30/120 (25%)
BTB 47..141 CDD:197585 28/109 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..293 37/172 (22%)
Binding to CtBP. /evidence=ECO:0000250 247..249 0/1 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..426 18/118 (15%)
C2H2 Zn finger 448..468 CDD:275368 5/25 (20%)
zf-C2H2 509..531 CDD:278523 5/22 (23%)
C2H2 Zn finger 511..531 CDD:275368 5/20 (25%)
zf-C2H2 537..559 CDD:278523 8/21 (38%)
C2H2 Zn finger 539..559 CDD:275368 8/19 (42%)
zf-H2C2_2 552..576 CDD:290200 4/8 (50%)
COG5048 563..>617 CDD:227381
C2H2 Zn finger 567..587 CDD:275368
zf-H2C2_2 580..604 CDD:290200
C2H2 Zn finger 595..615 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24394
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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