DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp190 and znf652

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_005163894.1 Gene:znf652 / 557571 ZFINID:ZDB-GENE-030131-5857 Length:648 Species:Danio rerio


Alignment Length:464 Identity:90/464 - (19%)
Similarity:158/464 - (34%) Gaps:108/464 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 SSNVKQEPTSPFEQLRKGYNNNKRPAQT---------SLLSPPSKKPSLEEV-------KEFAEQ 250
            |....:|..|..|.:.:......:|:||         |.|||...|...|:.       ...|..
Zfish     3 SCQTLREELSGLEAMTEEERPMTQPSQTYIHNTSAPHSELSPKIYKREAEDTPYSLAIDSTMATD 67

  Fly   251 QRMRKQIAAEYGDNDPEYDGGMLYDDVHAGDDDDDDMPPQPSTSKQQSPQGTQTQLEHGSTTIIL 315
            .:|..::  ....|.|.|..|......:.|..||.:        ...|..|.:.:.:.|.  ||:
Zfish    68 SQMPSEL--NPAPNQPFYREGAPAKTGNGGTSDDSE--------ADDSGAGAEDEFKRGQ--IIV 120

  Fly   316 KQDSPSQTPTI--------IVKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIKLKIMPNTPAAPT 372
            :.:..:||..:        ...|.||::.:..:...|...:...:.:.:.:     :........
Zfish   121 EVNLNNQTLHVSKGDDAGNAAGDKSNSEEDEDEDDEEEEEEEDSVEENYSD-----LDEDEEEEE 180

  Fly   373 EKSAPATVKPPANQSSATTSPHKKLHVSFKADKSTPLITAQQKAASSQQKSGTSQTTGNQGTGAN 437
            |.::..|....|.:...|..|.:|               :::.||||...||.: |.|.:.....
Zfish   181 ENNSRRTRAQRAQRGRTTAQPRRK---------------SRRVAASSVTSSGVT-TRGRRKHAEA 229

  Fly   438 PPANTAAAQKRRIDSKTMHALIAQGAENTTG----------PWLCLRCGVNGRPISIPSYRGFRR 492
            ||.....|::.:..:.:     |.||..|.|          ...|.:|   .|..:...|  ..:
Zfish   230 PPQKCRPAKEAKSSASS-----ASGATPTGGGAKGEGEEKETLACEKC---PRVFNTRWY--LEK 284

  Fly   493 HLINTHKETIDPALCEHCGWRSVNNRELHFH--------------------MYMEHQTKSLLYTF 537
            |:..||:..   .:|:.||.:.|...||..|                    ::..|:...:::.|
Zfish   285 HMNVTHRRM---QICDKCGKKFVLESELALHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGF 346

  Fly   538 AE----CALCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDG 598
            ||    |.:|.:.:.|...:..|: ..||.|....|..|.|.|::.:.|..|...:..|:...  
Zfish   347 AEKKFACEICEKKFYTMAHVRKHM-VAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFR-- 408

  Fly   599 IIDETDEEF 607
             .:..||.|
Zfish   409 -CENCDERF 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045
BTB 31..127 CDD:197585
C2H2 Zn finger 540..568 CDD:275371 7/27 (26%)
C2H2 Zn finger 569..586 CDD:275371 5/16 (31%)
znf652XP_005163894.1 C2H2 Zn finger 269..288 CDD:275368 5/23 (22%)
C2H2 Zn finger 296..315 CDD:275368 7/18 (39%)
C2H2 Zn finger 323..343 CDD:275368 1/19 (5%)
C2H2 Zn finger 353..373 CDD:275368 4/20 (20%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
zf-H2C2_2 393..416 CDD:290200 5/25 (20%)
C2H2 Zn finger 409..429 CDD:275368 3/8 (38%)
C2H2 Zn finger 437..457 CDD:275368
zf-H2C2_2 449..474 CDD:290200
C2H2 Zn finger 465..485 CDD:275368
zf-H2C2_2 477..500 CDD:290200
C2H2 Zn finger 493..510 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24394
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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