DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp190 and znf652

DIOPT Version :10

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_685749.4 Gene:znf652 / 557571 ZFINID:ZDB-GENE-030131-5857 Length:648 Species:Danio rerio


Alignment Length:464 Identity:90/464 - (19%)
Similarity:158/464 - (34%) Gaps:108/464 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 SSNVKQEPTSPFEQLRKGYNNNKRPAQT---------SLLSPPSKKPSLEEV-------KEFAEQ 250
            |....:|..|..|.:.:......:|:||         |.|||...|...|:.       ...|..
Zfish     3 SCQTLREELSGLEAMTEEERPMTQPSQTYIHNTSAPHSELSPKIYKREAEDTPYSLAIDSTMATD 67

  Fly   251 QRMRKQIAAEYGDNDPEYDGGMLYDDVHAGDDDDDDMPPQPSTSKQQSPQGTQTQLEHGSTTIIL 315
            .:|..::  ....|.|.|..|......:.|..||.:        ...|..|.:.:.:.|.  ||:
Zfish    68 SQMPSEL--NPAPNQPFYREGAPAKTGNGGTSDDSE--------ADDSGAGAEDEFKRGQ--IIV 120

  Fly   316 KQDSPSQTPTI--------IVKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIKLKIMPNTPAAPT 372
            :.:..:||..:        ...|.||::.:..:...|...:...:.:.:.:     :........
Zfish   121 EVNLNNQTLHVSKGDDAGNAAGDKSNSEEDEDEDDEEEEEEEDSVEENYSD-----LDEDEEEEE 180

  Fly   373 EKSAPATVKPPANQSSATTSPHKKLHVSFKADKSTPLITAQQKAASSQQKSGTSQTTGNQGTGAN 437
            |.::..|....|.:...|..|.:|               :::.||||...||.: |.|.:.....
Zfish   181 ENNSRRTRAQRAQRGRTTAQPRRK---------------SRRVAASSVTSSGVT-TRGRRKHAEA 229

  Fly   438 PPANTAAAQKRRIDSKTMHALIAQGAENTTG----------PWLCLRCGVNGRPISIPSYRGFRR 492
            ||.....|::.:..:.:     |.||..|.|          ...|.:|   .|..:...|  ..:
Zfish   230 PPQKCRPAKEAKSSASS-----ASGATPTGGGAKGEGEEKETLACEKC---PRVFNTRWY--LEK 284

  Fly   493 HLINTHKETIDPALCEHCGWRSVNNRELHFH--------------------MYMEHQTKSLLYTF 537
            |:..||:..   .:|:.||.:.|...||..|                    ::..|:...:::.|
Zfish   285 HMNVTHRRM---QICDKCGKKFVLESELALHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGF 346

  Fly   538 AE----CALCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDG 598
            ||    |.:|.:.:.|...:..|: ..||.|....|..|.|.|::.:.|..|...:..|:...  
Zfish   347 AEKKFACEICEKKFYTMAHVRKHM-VAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFR-- 408

  Fly   599 IIDETDEEF 607
             .:..||.|
Zfish   409 -CENCDERF 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB_POZ_CP190-like 16..125 CDD:349620
COG5236 <471..>594 CDD:227561 32/146 (22%)
C2H2 Zn finger 540..568 CDD:275371 7/27 (26%)
C2H2 Zn finger 569..586 CDD:275371 5/16 (31%)
PTZ00121 <709..1075 CDD:173412
znf652XP_685749.4 PLN03086 <267..326 CDD:178635 14/66 (21%)
C2H2 Zn finger 269..288 CDD:275368 5/23 (22%)
C2H2 Zn finger 296..315 CDD:275368 7/18 (39%)
C2H2 Zn finger 323..343 CDD:275368 1/19 (5%)
C2H2 Zn finger 353..373 CDD:275368 4/20 (20%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
C2H2 Zn finger 409..429 CDD:275368 3/8 (38%)
C2H2 Zn finger 437..457 CDD:275368
SFP1 <459..510 CDD:227516
C2H2 Zn finger 465..485 CDD:275368
C2H2 Zn finger 493..510 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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