DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and zbtb40

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_002937082.3 Gene:zbtb40 / 548670 XenbaseID:XB-GENE-967576 Length:1352 Species:Xenopus tropicalis


Alignment Length:902 Identity:165/902 - (18%)
Similarity:281/902 - (31%) Gaps:330/902 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LQNFFNKTDY-CDLTLQFRDNSQLKV--HRLVLSACTDYFNVLEQTCEIVDDALIMPNEFQADVV 81
            |::....||| .:|..|:::|....|  ..|:|||.|...|:.....|:::.  ::.....:.:.
 Frog   560 LKDKMTTTDYGAELLRQYQENFSEVVTDSELMLSAITTTVNLTTHEREVMEQ--VVKKNTTSKIF 622

  Fly    82 VPIVNFMYTGTLEFELKMYGKLLRTAKEMNMTVLLKLLEAHRRTMENVNRQQRPPSPKGIRRRTV 146
            ..:|:                ::...:.:.:|.|..||.|         .|:..||.|.:.....
 Frog   623 STLVS----------------MVLDEQTLAVTALWLLLLA---------MQESNPSLKSLMEEIR 662

  Fly   147 GQPSSGLPQQRVLGPSPQSRNVATPIAQRANTQRGSTGNTMSRTSGGSNRSPYGDSSNV------ 205
            .:|.:.:..|.|:...    |.|..:..|.|       ..:::..|..:...|..|...      
 Frog   663 KEPGAEVFFQSVINRG----NEAAEVLVRHN-------ELIAQAFGQCDILSYVPSKETALTDLV 716

  Fly   206 ---------KQEPTSPFEQLRKGYNNNKRPAQT--SLL-----SPPSKKPSLEEVKEF------- 247
                     .::...|.:.|......:..||.:  |||     |.|..:|.::|:|:.       
 Frog   717 KELLKVPQQNEDSELPSKMLLSAALQHTVPAMSFCSLLFTVQGSSPHLQPVIKELKQIGILMEGE 781

  Fly   248 ------------AEQQRMRKQIAAEYGDNDPEYDGGMLYDDVHAGD---DDDDDMPPQPSTSK-- 295
                        :|.|.:..:.:||..|.:.:    ..||:...||   :..|.:..:.|:.|  
 Frog   782 ESFQGVSRWNVNSECQLVVAEDSAEGNDEEEQ----TKYDENEDGDSSKESKDSVQEKGSSKKNF 842

  Fly   296 -------------------------QQSP---------QGTQTQLE------HGSTTIILKQDSP 320
                                     :::|         |.::.:|:      ||  .::..:.:.
 Frog   843 ICKSCDKIFLFRCRLEVHMKRCRMAKRNPLQCKDCNEIQSSRKELDQHREAVHG--YLVSSRTNK 905

  Fly   321 SQTPTIIVKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIKLKIMPNTPAAPTEKSAPATVKPPAN 385
            .:...::..|....:..|           |..::.||  :.:.....|.:..|..|    |..||
 Frog   906 GRRRLLVTCDICGKEFAH-----------PSGLQYHK--RTEHFDEKPFSCDECGA----KFAAN 953

  Fly   386 QSSATTSPHKKLHVSFKADKSTPLI------TAQQKAASSQQKSGTSQTTGNQGTGANPPANTAA 444
               :|...|::||..     ..|.:      |..|.||.|..                       
 Frog   954 ---STLKNHQRLHTG-----ERPFVCKHCHMTFTQAAALSYH----------------------- 987

  Fly   445 AQKRRIDSKT-----MHALIAQGAENT------TG--PWLCLRCG-----VNGRPI--------- 482
            .:|:..:.|.     ..|:.||..|.|      ||  |::|..||     .||..|         
 Frog   988 TKKKHSEGKMYACQYCDAVFAQSIELTRHVRTHTGDKPYVCRECGKGFSQANGLSIHLRTFHNIE 1052

  Fly   483 ----------SIPSYRGFRRHLINTHKE------TID-----PALCE-----HCGWRSVN----- 516
                      |.|:....|:|:...|.:      |.|     |:|.|     |.|.:..|     
 Frog  1053 DPYDCQKCRMSFPTLEENRQHIQVVHSKEYHPCPTCDKIFSAPSLLERHVVTHVGGKPYNCEICD 1117

  Fly   517 ------------NRELHFHMYMEHQTKSLLY---------TFA-------------------ECA 541
                        ||..|..::.....:|..:         ||.                   ||.
 Frog  1118 KAYQQLSGLWYHNRTHHPDLFAAQNHRSSKFSTQCSSCDQTFPNAALLQKHTKAEHPDGKVYECD 1182

  Fly   542 LCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDGIIDETDEE 606
            .|.|:|.|...|:.||...|:.....||:||...|:....|..|:.:.|         ..|:|..
 Frog  1183 KCKQTYPTSAALQVHIKCKHSGTQPFQCLYCTDSFQFPGALQHHVATEH---------FHESDNT 1238

  Fly   607 F----------LGSQDEEEEAEGDEEQEPEQTGKVRILSDISLPATSAITVQQAQQEQLQEEDVE 661
            |          :.||.|...    |...||.     :|::.....|..:.|.|.|.:....|.| 
 Frog  1239 FGCEICGELFTVHSQLERHY----ETDHPEV-----VLTENQAADTQMVQVIQTQDQVAATEQV- 1293

  Fly   662 QVQQEVKFVGADGNEVELTDEQRKEILSQLNQQQAGATA--------GGVVMVLSEP 710
             :..:...:......|.|.|       :|:||......|        |.|.::.|:|
 Frog  1294 -ITLDESHLAGSQVIVALPD-------TQVNQTTTELVAVSMEDLLDGTVTLICSDP 1342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045 20/104 (19%)
BTB 31..127 CDD:197585 17/97 (18%)
C2H2 Zn finger 540..568 CDD:275371 9/27 (33%)
C2H2 Zn finger 569..586 CDD:275371 5/16 (31%)
zbtb40XP_002937082.3 BTB_POZ_ZBTB40 1..116 CDD:349534
C2H2 Zn finger 874..904 CDD:275368 4/31 (13%)
COG5048 <913..1075 CDD:227381 41/209 (20%)
C2H2 Zn finger 914..935 CDD:275368 5/33 (15%)
C2H2 Zn finger 943..963 CDD:275368 7/26 (27%)
C2H2 Zn finger 971..1020 CDD:275368 12/71 (17%)
zf-H2C2_2 1012..1037 CDD:404364 8/24 (33%)
SFP1 <1022..1136 CDD:227516 24/113 (21%)
C2H2 Zn finger 1028..1047 CDD:275368 6/18 (33%)
C2H2 Zn finger 1057..1078 CDD:275370 4/20 (20%)
C2H2 Zn finger 1085..1104 CDD:275368 5/18 (28%)
SFP1 <1106..1173 CDD:227516 8/66 (12%)
C2H2 Zn finger 1113..1133 CDD:275368 2/19 (11%)
zf-C2H2_8 1152..1233 CDD:406359 20/89 (22%)
C2H2 Zn finger 1152..1170 CDD:275368 2/17 (12%)
C2H2 Zn finger 1181..1202 CDD:275368 8/20 (40%)
C2H2 Zn finger 1210..1229 CDD:275368 6/18 (33%)
C2H2 Zn finger 1241..1257 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24394
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.