DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and Lmpt

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster


Alignment Length:1139 Identity:217/1139 - (19%)
Similarity:392/1139 - (34%) Gaps:333/1139 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TLQFRDNSQLKVHRLVLSACTDYFNVLEQTCEIVDDALIMPNEFQADVVVP------IVNFMYTG 91
            |..:||.     :.|::...:|:::.         .|.:.|:..::....|      :.|.| .|
  Fly   754 TAPWRDQ-----YGLLMEGLSDFYDF---------TASVNPSRSRSASRNPSPAPKNVANLM-DG 803

  Fly    92 TLEFELKMYGKLLR--TAKEMNMTVLLKLLEAHRRTMENVNRQQRPPSPKGIRRRTVGQPS---- 150
            ..|..|::|.....  .|.|:|...:|:|||::....|:.|.|        ::.:||...:    
  Fly   804 DTERSLEVYDDTQEGVMAGELNCESVLQLLESNLNETESTNDQ--------LQVQTVADDARDGK 860

  Fly   151 SGLP------QQRVLGPSPQSRNVATPIAQRANTQRGSTGNTMSRTSGGSNRSPYGDSSNVKQEP 209
            |.||      :...||...:.|.           :..|.|...|| |...:|||...|.|:::..
  Fly   861 SILPMVHEPLESSALGAVLEERG-----------REPSVGRIQSR-SRSRSRSPLPTSENLEKSI 913

  Fly   210 TSPFEQLRKGYNNNKRPAQTSLLSPPSK-----------KPSLE--------EVKEFAEQQRMRK 255
            ....|:|.|  .|::...:.|..||...           .|:||        |:.|.|::     
  Fly   914 HKRRERLIK--QNDELAERLSHSSPEDSMEIETSDNGRLSPTLEVTLPQPVIEINEMADE----- 971

  Fly   256 QIAAEYGDNDPEYDGGMLYDDVHAGDDDDDDMPPQPSTSKQQSPQGTQTQLEHGSTTIILKQDSP 320
              ..|..:..|| :..:..:.:.|     :......|.|:.:||..|...:|....:..||    
  Fly   972 --PMEDAETTPE-EMRLFVETLRA-----ERNARSRSRSRSRSPLPTAGNIEKSLESRRLK---- 1024

  Fly   321 SQTPTIIVKDSSNAKLNHTKIIAEVLRQY---PHIVKGHKNIKLKIMPNTP----------AAPT 372
                          ::.|...|.|.|...   |.|:     |:....|:.|          |.|.
  Fly  1025 --------------RIQHNDEIFEKLHDQMSSPQII-----IESASPPSLPLPLPTISIEIAEPP 1070

  Fly   373 EKSAPATVKPPANQSSATTSPHKKLHVSFKADKSTPLITAQQKAASSQQKSGTSQTTGNQGTGAN 437
            |::|..|...|.:...:.....::|.::             :..:.|:.:|.:...|        
  Fly  1071 EENASHTEAEPEDTPESMARLFEQLRLN-------------RVRSHSRSRSRSPLPT-------- 1114

  Fly   438 PPAN-TAAAQKRRIDSKTMHALIAQGAE---------NTTGPWLCLRC----------------G 476
             ||| ..:.||||      ..||||..:         .|..|...|..                |
  Fly  1115 -PANLEQSVQKRR------ERLIAQNDQFFEVLQERARTPEPETRLTVEYVYEYVQEKDEQVGEG 1172

  Fly   477 VNGRPISIPSYRGFRRHLINTHKETIDPALCEHCGWRSVNNRELHFHMYMEHQTKSLLYTFAECA 541
            .:.|.:| ||     |....:.::.:|                 .||:.:..:...|        
  Fly  1173 RDKRSLS-PS-----RSRSQSQEKALD-----------------DFHLMLNLEGSEL-------- 1206

  Fly   542 LCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDGIIDETDEE 606
                  ||..:....:..|.....||          :|:.:....|.::..:.:|..::..|:.|
  Fly  1207 ------RTLRKNSEELESVLAVGAKQ----------REVDMDALEKLHNANEEIELRVLSPTNSE 1255

  Fly   607 FLGSQDEEEEAEGDEEQEPEQTGKVRILSDISLPATSAITVQQAQQEQLQEEDVEQVQQEVKFVG 671
            .          |...|...|.....|.:|:::              ..||:|.:....:...:| 
  Fly  1256 L----------ERVVEMTRENPDMDRTVSEVA--------------RDLQDELMASGFKRSTYV- 1295

  Fly   672 ADGNEVELTDEQRKEILSQLNQ-QQAGATAGGVVMVLSEPEAEHVKQETDEKSLAGTEEEYDDSQ 735
              |..::|..:|.||:..:..| |::.:.:.|..|..:..:|. .::|.....|        ||.
  Fly  1296 --GESLDLGSDQFKELRREAAQFQRSRSPSPGSSMDYAREQAA-AQRELQTAIL--------DSL 1349

  Fly   736 IYSELGAADSVESAKK--NIADESKESIDNLEWAENLIAESEEQSNKEPKSDKPRDDISE-KLKE 797
            ..|.|||.....|.::  ...|.|...:|:|.........|..||         |..:.| :|.:
  Fly  1350 TESRLGAKPKTYSEERTGEFEDISAAQLDDLRHRTAEFQRSRSQS---------RSPLREVELTQ 1405

  Fly   798 LTGDWTEDENDDDVDDKPATAELASELANKDPEPTVHEEEDDIDLALQSLHKGPEEATEEKASEE 862
            |.          |::.:.|..||..:|.::....:::.|.       .|.|...:....|:.:.:
  Fly  1406 LR----------DIEAESAKRELQDQLLDRLAASSINFEN-------FSRHLNADFLDSERRASD 1453

  Fly   863 SVTSADDAVDAVPNIN--SQPEKMDVDSEAADEKASKAEVQIK---------KEAELENDQEEFI 916
            |....|...|...:..  |..::..|:...:|:....::::::         ||....::..:|.
  Fly  1454 SALMGDMEPDEYHHFRRYSLAQEQPVEEYPSDDYVYISQIEVRTLTGTRTWLKEDFYTHEPNDFS 1518

  Fly   917 KEDSPIPHSDSVAELREAVTASEGEDDVHLEADNIRKELLDELIAEAEKPDQEKDIVQSEENATT 981
            ...||:...||.|   .||.|:|.|   ..|.|:.......:::.:.|..|||:.  .|.::..|
  Fly  1519 DSKSPVRDEDSWA---RAVLAAEAE---AAEFDSTNAIYSYDIVGDHENLDQERS--SSNDSEDT 1575

  Fly   982 EALDRSVTDEDDLVPPTQVSTEQMEIDEPAAEKAAENNEDTRTADEKEAVEDKPNQTQDVTTAEK 1046
            ......:.|||:.         :.|:|    |..::|||.|:..||..      :.|.:...||:
  Fly  1576 RQTVVEIDDEDEF---------EFELD----EGISDNNERTQPTDESH------HDTSECEEAER 1621

  Fly  1047 PTLESAKAGDEATSGEAASVDKVKSLISEWGDDD 1080
                :|...:...:.:...||.|:..: ::|.||
  Fly  1622 ----NADRYENRGAQDWEEVDDVEDFL-DYGFDD 1650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045 21/96 (22%)
BTB 31..127 CDD:197585 21/101 (21%)
C2H2 Zn finger 540..568 CDD:275371 4/27 (15%)
C2H2 Zn finger 569..586 CDD:275371 1/16 (6%)
LmptNP_996113.2 GBP_C <103..201 CDD:303769
ARGLU 110..255 CDD:291991
coiled coil 170..181 CDD:293879
coiled coil 190..201 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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