DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and Zbtb42

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001093930.1 Gene:Zbtb42 / 382639 MGIID:3644133 Length:420 Species:Mus musculus


Alignment Length:618 Identity:111/618 - (17%)
Similarity:174/618 - (28%) Gaps:253/618 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GVFFLQKLQNFFNKTDYCDLTLQFRDNSQLKVHRLVLSACTDYFNVL--EQTCEIVDDALIMPNE 75
            ||..|.:|:........||.|:...| ::...||.||:||:.||::.  :|.....|..     .
Mouse     7 GVRLLGRLRQQRELGFLCDCTVLVGD-ARFPAHRAVLAACSVYFHLFYRDQPASSRDTV-----R 65

  Fly    76 FQADVV-VP----IVNFMYTGTLEFELKMYGKLLRTAKEMNMTVLLKLLEAHRRTMENVNRQQRP 135
            ...|:| ||    :::|||.|.|:........:|..|..::|..::|:.:...|        ::.
Mouse    66 LNGDIVTVPAFSRLLDFMYEGRLDLHNLPVEDVLAAASYLHMYDIVKVCKGRLR--------KKD 122

  Fly   136 PSPKGIRRRTVGQPSSGLPQQRVLGPSPQSRNVATPIAQRANTQRGSTGNTMSRTSGGSNRSPYG 200
            |.   :..||:|....|.|...:...||.....|                               
Mouse   123 PD---LETRTLGTELPGQPPHPLPSWSPAFCQAA------------------------------- 153

  Fly   201 DSSNVKQEPTSPFEQLRKGYNNNKRPAQTSLLSPPSKKPSLEEVKEFAEQQRMRKQIAAEYGDND 265
                                             |.:|.|||                        
Mouse   154 ---------------------------------PKAKHPSL------------------------ 161

  Fly   266 PEYDGGMLYDDVHAGDDDDDDMPPQPSTSKQQSPQGTQTQLEHGSTTIILKQDSPSQTPTIIVKD 330
                      .|.|........||....::|.|                                
Mouse   162 ----------GVKATHPLPTFGPPSWQVAEQSS-------------------------------- 184

  Fly   331 SSNAKLNHTKIIAEVLRQYPHIVKGHKNIKLKIMPNTPAAPTEKSAPATVKPPANQSSATTSPHK 395
                                    |..::.||..|.          |..|.||....::..|..:
Mouse   185 ------------------------GALDLSLKPSPR----------PEQVHPPCRLQTSLCSSVQ 215

  Fly   396 KLHVSFKADKSTPLITAQQKAASSQQKSGTSQTTGNQGTGANPPANTAAAQKRRIDSKTMHALIA 460
            ::        :.||:.|:|.:.|.|..|.......:.     ||...:|||...:|.:.:|    
Mouse   216 QV--------AQPLVKAEQDSFSEQDSSSPQSADRSP-----PPVCASAAQGLAVDLEPLH---- 263

  Fly   461 QGAENTTGPWLCLRCGVNGRPISIPSYRGFRRHLINTHKETIDPALCEHCGWRSVNNRELHFHMY 525
              .|.|....|    |:...|:......|..|||      .|.|..|:.  :.|.:..:||...:
Mouse   264 --IEGTGSQQL----GLPAEPVLDSEELGPSRHL------CICPLCCKL--FPSTHALQLHLSAH 314

  Fly   526 MEH---------------------QTKSLLYTFAE------------CALCNQSYRTKGELEAHI 557
            ...                     :|.|..||...            |..|.:|::....|..|.
Mouse   315 FRERDSVRARLSPEGSVPTCPLCSKTFSCTYTLKRHERTHSGEKPYTCVQCGKSFQYSHNLSRHA 379

  Fly   558 NEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYH 590
             .|||.:....|.:|.:.|.|...||||::.:|
Mouse   380 -VVHTREKPHACRWCERRFTQSGDLYRHVRKFH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045 28/108 (26%)
BTB 31..127 CDD:197585 27/102 (26%)
C2H2 Zn finger 540..568 CDD:275371 8/27 (30%)
C2H2 Zn finger 569..586 CDD:275371 7/16 (44%)
Zbtb42NP_001093930.1 BTB 14..114 CDD:279045 28/105 (27%)
BTB 25..121 CDD:197585 27/109 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..204 26/240 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..247 6/29 (21%)
C2H2 Zn finger 294..314 CDD:275368 5/21 (24%)
COG5048 334..>388 CDD:227381 12/54 (22%)
C2H2 Zn finger 334..354 CDD:275368 4/19 (21%)
zf-H2C2_2 347..369 CDD:290200 2/21 (10%)
C2H2 Zn finger 362..382 CDD:275368 5/20 (25%)
C2H2 Zn finger 390..408 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24394
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.