DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp190 and Muc18B

DIOPT Version :10

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_573365.1 Gene:Muc18B / 32913 FlyBaseID:FBgn0031000 Length:308 Species:Drosophila melanogaster


Alignment Length:227 Identity:43/227 - (18%)
Similarity:84/227 - (37%) Gaps:64/227 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   915 FIKEDSPIPHSDSVAELREAVTASEGEDDVHLEADNIRKELLDELIAEAEKPDQE---------- 969
            |::..:.:..|.|:|:..:::.|.|..||.::|...|....|||  :..|||..|          
  Fly    55 FLRCPAGLVFSSSMAQCVQSIAAFEARDDSNIENPTIPPSNLDE--STTEKPATEAPGTTEKVTT 117

  Fly   970 -----KDIVQSEENATTEALDRSVTDEDDLV--------------------------------PP 997
                 .:.|.:|...|||.:........:.:                                |.
  Fly   118 AAPGTTEKVTTEAPGTTEKITTEAPGTTEKITTEAPGTTEKITTEAPGTTEKITTEAPGTTEKPA 182

  Fly   998 TQV--STEQMEIDEPAAEKAAENNEDTRTADEKEA---VEDKPNQTQDVTTAEKPTLESAKAGDE 1057
            |..  :||:...|.|...:.:|..:...|.|:.:.   :.|:|:..:  |:.::|..|:.::|:|
  Fly   183 TDAPGTTEKPATDAPGTTEKSETTDAPGTTDKSDTDAPITDEPSTAE--TSTDEPNTETTESGEE 245

  Fly  1058 --------ATSGEAASVDKVKSLISEWGDDDE 1081
                    ||:|...:......::..:.:.||
  Fly   246 TTIEDNVCATTGLFPTGSCTHFIVCSYAEGDE 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB_POZ_CP190-like 16..125 CDD:349620
COG5236 <471..>594 CDD:227561
C2H2 Zn finger 540..568 CDD:275371
C2H2 Zn finger 569..586 CDD:275371
PTZ00121 <709..1075 CDD:173412 41/219 (19%)
Muc18BNP_573365.1 CBM_14 26..72 CDD:426342 4/16 (25%)
motB <90..208 CDD:183756 20/119 (17%)
Blue background indicates that the domain is not in the aligned region.

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