DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and CG34417

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster


Alignment Length:1168 Identity:233/1168 - (19%)
Similarity:388/1168 - (33%) Gaps:370/1168 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 RRTMENVNRQQRPPS-----PKGIRRRTVGQPSSGLPQQ----------------------RVLG 160
            |||..|:|......:     |..| :.|..:|:|..|.:                      ...|
  Fly  2430 RRTSTNLNTTSTNTTTTTEHPSTI-KTTTPKPTSTNPSKDEPEIIPIESLTEKSITTTYTTNTTG 2493

  Fly   161 PSPQS-RNVATPIAQRANTQRGSTGNTMS-------------RTSGGSNRSPYGDSSNVKQ---- 207
            .:..| |||..|: ...:.....||...|             |.|...|:|.|...|:::.    
  Fly  2494 RNVASRRNVFEPV-HETHVDSEPTGRRPSYMDHTKSSLEHIRRDSLEINKSHYSRKSSMEDDSPV 2557

  Fly   208 EPTSP-----FEQLRKGYNNN-KRPAQTSLLSPPSKKPSLEEVKEFAEQQR------------MR 254
            ||.:|     |:..||..:.. ..|.:|||...........|::|..:.||            ||
  Fly  2558 EPRNPNSSVKFDVPRKSSSRGADEPRKTSLKGKDEDSDLELEIEEIFDLQRLEKLLETVASYEMR 2622

  Fly   255 KQIAAEYGDNDPEYDGGMLYDD-VHAG----------DDDDDDMPPQPSTSKQQSPQG-TQTQLE 307
            ::|.|:.         .::..: ::||          ........|.|...:.|||.| .:.:.:
  Fly  2623 RRIRAQM---------RLIRKNMINAGTTTTITTITTSTTPGKSSPLPKIRRDQSPAGAAEVKTK 2678

  Fly   308 HGSTTIILKQDS------PSQTPTIIVKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIKLKIMPN 366
            ...||...:|..      .|.||....|.|.:.|                               
  Fly  2679 EVRTTTSRRQQQQRVEQVDSTTPIAPGKTSPHGK------------------------------- 2712

  Fly   367 TPAAPTEKSA-PA---TVKPPANQS----SATT------------SPHKKLHVSFKADKSTPL-- 409
            .|..|.|:|| ||   .:.||..||    |.||            :|.|.......||:|..|  
  Fly  2713 PPVKPRERSASPAQKRRISPPGKQSPGDRSTTTTTKVTTTSTTRGAPSKPAQGPIWADRSKVLKG 2777

  Fly   410 -ITAQQKAASSQQKSGTSQTTGNQG------------TGANPPANTAAAQKRRIDSKTMHALIAQ 461
             .|..|...|:.:|..||.||.:.|            |.::...||...| |..||.|       
  Fly  2778 HATVPQTNGSTPRKGSTSSTTSSSGKITRTMTSSSTTTSSSSTTNTRNKQ-REEDSIT------- 2834

  Fly   462 GAENTTGPWLCLRCGVNGRPISIPSYRGFRRHLINTHKETIDPALCEHCGWR-SVNNRELHFHMY 525
             :....||     ...||.|:.     |.|     ..|:...|...|.|..: .|....:....|
  Fly  2835 -SSYGVGP-----TDENGLPLF-----GIR-----ALKKKATPPAEEPCETKQEVTGYVIEEQFY 2883

  Fly   526 ME------HQTKSLLYTFAECALCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYR 584
            .:      |:.|.|:|:           ....||.|...::..:|:....:.       :.::.|
  Fly  2884 SDNKSPPRHERKELIYS-----------SNADELAAIKQQLQDEDDSSPPLL-------DARVVR 2930

  Fly   585 HMKSYHKEQAL-ED------GIIDETDEEFLGSQD-----------------EEEEAEGDEE--- 622
            ..|....:|:| ||      |.:.|..|:|:..:.                 .|:|.|.|.|   
  Fly  2931 EFKKVESQQSLPEDARYVRRGSVKELSEKFIRKESSSSTHSTHSSIAQSLVRHEDETEDDSESND 2995

  Fly   623 -----QEPE-QTGKVRILSDISLPATSAITVQQAQQEQLQE-EDVEQVQQEVKFVGADGNEVELT 680
                 :.|: :..:...:|......|.:.....|.|.|:.. :||.:..:....|...|:..|  
  Fly  2996 VCSVIEAPQMRQNQSHTMSTTRSSNTRSFLNSSADQRQVTSVDDVLERMRNADNVEEPGDSSE-- 3058

  Fly   681 DEQRKEILS-----------------------QLNQQQAGAT--------AGGVVMVLSEPEAEH 714
            |.:.:.:|:                       :||.|....|        :|.     |.....:
  Fly  3059 DREARALLNKFLGASVIMQGVESMLPPTATGQRLNSQGVKTTRITNTYSKSGN-----STSTTNN 3118

  Fly   715 VKQETDEKSLAGTE--------EEYDDSQIYSELGAADSVESAKKNIADESKESIDNLEWAENLI 771
            ....|::.|.:...        ||..|.|:..:|....|....::.|....:|          |:
  Fly  3119 TSNTTNKVSSSSAPVTRTTCDIEEIWDEQVLKQLLEQASTYEERRKIRARLRE----------LM 3173

  Fly   772 AESEEQSN--KEPKSDKPRDDIS-----EKLKELTGDWTEDENDDDVDDKPATAELASELANKDP 829
            ||.|||.|  :.||.:|..::.|     |.::|:|....|:|......::|...|:..:...| .
  Fly  3174 AEREEQKNLKQAPKEEKEEEESSASEYEEIIEEVTDYSDEEEEVPPKKEEPKKEEVTKKEVTK-K 3237

  Fly   830 EPTVHEEEDDIDLALQSLHKGPEEATEEKASE--ESVTSADDAVD-AVPNINSQPEKMDVDSEAA 891
            |.|..::|:....|::.:.|     ||.|.|:  |||:.....|: |..:.:|..:.:.|..|:.
  Fly  3238 EVTTKQQEEIQQKAVKKVEK-----TETKTSQATESVSKKLAKVELASSSSSSTTDGVQVQGESL 3297

  Fly   892 DEKASK------------AEVQIKKEAELENDQEEFI--------KEDSPIPHSDSVAE------ 930
            ..||:|            :.:..:|.:.|.:.|...:        .|..|:..:.|.:|      
  Fly  3298 PAKATKTGATGAAGPVSSSSIGSRKSSSLSSSQVSTVVRARDKAKPEMMPVAGTGSGSESVPGSG 3362

  Fly   931 -----LREAV-----TASEGEDDVHLEADNIRKELLDELIAEAEKPDQEKDIVQSEENATTEALD 985
                 .|.:|     :.:|..:|:.|.|..:|..|..:..::|.  :..:.:|:.    .|:||.
  Fly  3363 APNTGSRLSVPSKEDSGTESGEDLRLLAAGLRDTLQQQSGSDAS--EANRSLVEE----VTDALS 3421

  Fly   986 RSVTDEDDLVPPTQVSTE------------QMEIDEPAAEKAAENNEDTRTADEKEAVEDKPN 1036
            |.   |..|....:::.:            :::....|.||.||:.:......|.|....:|:
  Fly  3422 RL---ESSLKQGKELAVDGGQRQALLGLVARLQSGLSAPEKLAEDRKTDECQKEVETGSPEPD 3481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045
BTB 31..127 CDD:197585 3/3 (100%)
C2H2 Zn finger 540..568 CDD:275371 4/27 (15%)
C2H2 Zn finger 569..586 CDD:275371 1/16 (6%)
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290 8/50 (16%)
Smoothelin 3127..3176 CDD:289290 11/58 (19%)
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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