DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp190 and Ibsp

DIOPT Version :10

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_036719.2 Gene:Ibsp / 24477 RGDID:2855 Length:319 Species:Rattus norvegicus


Alignment Length:296 Identity:61/296 - (20%)
Similarity:112/296 - (37%) Gaps:95/296 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   560 VHTDDNKQQCIYCNKVFEQELQ--LYRHMKSY----------HKEQALEDGIIDETDEEFLGSQD 612
            :..:|:::     |.||:...:  ||:|...|          ..:.:.|:|..|.::||  |.::
  Rat    26 IKAEDSEE-----NGVFKYRPRYFLYKHAYFYPPLKRFPVQGGSDSSEENGDGDSSEEE--GEEE 83

  Fly   613 E-------EEEAEGDEEQEPE-------------------QTGKVRILSDISLPATS------AI 645
            |       .|::||:|:||.|                   ..||:. |:.:.||..:      |.
  Rat    84 ETSNEEENNEDSEGNEDQEAEAENATLSGVTASYGVETTADAGKLE-LAALQLPKKAGDAEGKAP 147

  Fly   646 TVQQAQQEQLQEEDVEQVQQEVKFVGADGNE--VELTDEQRKEILSQLNQQQAGATAGGVVMVLS 708
            .::::.:|:.:||:.|...:|.:   .|.||  |..|.....|:            .||     :
  Rat   148 KMKESDEEEEEEEEEENENEEAE---VDENEQVVNGTSTNSTEV------------DGG-----N 192

  Fly   709 EPEAEHVKQETDEKSL--AGTEEEYDDSQIYSELGAADSV-------------------ESAKKN 752
            .|......:|.:|.|:  ||.|.....::..:..|...:|                   ..|:|:
  Rat   193 GPSGGDNGEEAEEASVTEAGAEGTTAGARELTSYGTTTAVLLNGFQQTTPPPEAYGTTSPPARKS 257

  Fly   753 IADESKESIDNLEWAENLIAESEEQSNKEPKSDKPR 788
            ...|..|..:.:....|...|:.:::|.||:.|..|
  Rat   258 STVEYGEEYEQIGNEYNTAYETYDENNGEPRGDTYR 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB_POZ_CP190-like 16..125 CDD:349620
COG5236 <471..>594 CDD:227561 8/45 (18%)
C2H2 Zn finger 540..568 CDD:275371 1/7 (14%)
C2H2 Zn finger 569..586 CDD:275371 5/18 (28%)
PTZ00121 <709..1075 CDD:173412 20/101 (20%)
IbspNP_036719.2 BSP_II 17..316 CDD:461651 61/296 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..116 14/58 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..224 23/108 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..263 3/25 (12%)
Integrin-binding motif. /evidence=ECO:0000250|UniProtKB:P21815 288..290 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.

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