DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and T24E12.10

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_494646.2 Gene:T24E12.10 / 188866 WormBaseID:WBGene00020777 Length:1318 Species:Caenorhabditis elegans


Alignment Length:632 Identity:135/632 - (21%)
Similarity:227/632 - (35%) Gaps:195/632 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   578 QELQLYRHMKSYHKEQALEDGIIDETDEEFLGSQDEEEEA----EGDEEQEPE------------ 626
            ||.:|:.|            |...|...|..|::..:|.:    :|..|.|.:            
 Worm    33 QENRLFEH------------GQNTEAPVEVQGAEPNQEMSQDANQGSLESEHKKVTFPGLDVYFS 85

  Fly   627 QTGKVRILSDISLPATSAITVQQAQQEQLQE-EDVEQVQQEVKFVGADGNEVELTDEQRKEILSQ 690
            |.|::..:|.| |.|......|:.:..::.. :...::|::.|.:...    ..|...|:...||
 Worm    86 QIGELFKVSGI-LDAPIEPAPQKKKPNRVPNYKSKRKIQKKKKNIPVP----TYTRSARRSTKSQ 145

  Fly   691 LNQQQAGATAGGVVMVLSEPEAEHVKQETDEKSLAGTEEEYDDSQIYSELGAADSVESAKKNIAD 755
            .|..|...       |.|..||..:::..|..:|  ::.:.||                     |
 Worm   146 RNLWQTND-------VSSTSEATRIQEPIDWITL--SDCDLDD---------------------D 180

  Fly   756 ESKESIDNLEWAENL------IAESEEQSNKEPKSDKPRDDISEKLKELTGDWTEDEN-----DD 809
            ...||:..||.|:|.      |||....|.....|.:|::  ...|.|:.||..:|::     ||
 Worm   181 VPGESVAPLELAQNCDDVVAPIAEPSSSSANHEASLEPQE--VSPLPEVQGDLEKDDHDHLLPDD 243

  Fly   810 DVDDK--PATAEL--------------ASELANKDPEPTVHEEEDDIDLALQ-----------SL 847
            .|:.:  |.:.|:              .:.:..::|.|:...::|..:.|.|           |:
 Worm   244 SVEPQNGPTSLEVQGCEAEDGHDHEFCVNSVVPQEPSPSPEVQDDQTEDAQQFSVSSAVPIAPSI 308

  Fly   848 HK--GPEEATEEKASEESVTSADDAVDAVPNINSQPEKMDVDSEAADEKASKAEVQIKKEAELEN 910
            .|  ...|.:.|..|.|....||.|.|...:::.      |:|....|..:..||| ..|||.:|
 Worm   309 GKDDSQHEMSAEVQSMEPEVQADFAKDFHDHVSC------VNSVVPHEPVNSQEVQ-DYEAEDDN 366

  Fly   911 DQEEFIKEDSPIPHSDSVAELREAVTASEGEDDVHLE----------------ADNIRKELLDEL 959
            |    :...|..|    |||...:.|.||.::.|.::                |:....:..||:
 Worm   367 D----LSAQSVAP----VAESFSSATTSEPQEIVEIQEHHAAHQLPAVSVATFAETSDNKATDEM 423

  Fly   960 IAEAEKPDQE----------KDIVQSEE--NATTEALDRSVTDE-------------DDLVPPTQ 999
            ..||  ||..          ::|..|.:  |:..:.|:.|.:.|             |.|:.|.:
 Worm   424 SMEA--PDDHQFSIHWVSNFEEISFSPDGYNSLMDPLETSQSPEVRDYVNEDGHDFCDSLIKPKE 486

  Fly  1000 VSTEQMEIDEPAAEKAA----ENNEDTRTADE-----------------KEAVEDKPNQTQDVTT 1043
            :| :..::.|..||.||    .|.|.:..:||                 ..|..|.|.:.|:  |
 Worm   487 LS-QSTKVREAQAEDAAPSVSPNYEASLASDEALCEIVVEVQEDRQFSSSPASHDAPIEQQE--T 548

  Fly  1044 AEKPTLESAKAGDEATSGEAASVDKVKSLISEWGDDDEDEDENGVSA 1090
            ::.|. ......:||......||..||:.::      .||..:.:||
 Worm   549 SQSPE-NQYDIDEEAHHLSTQSVAPVKAFLA------NDETPHEISA 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045
BTB 31..127 CDD:197585
C2H2 Zn finger 540..568 CDD:275371
C2H2 Zn finger 569..586 CDD:275371 3/7 (43%)
T24E12.10NP_494646.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.