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Protein Alignment Cp190 and zbtb47b

DIOPT Version :9

Sequence 1:	NP_524359.2	Gene:	Cp190 / 41848	FlyBaseID:	FBgn0000283	Length:	1096	Species:	Drosophila melanogaster
Sequence 2:	XP_003201350.1	Gene:	zbtb47b / 100536838	ZFINID:	ZDB-GENE-091118-34	Length:	639	Species:	Danio rerio

Alignment Length:	619	Identity:	113/619 - (18%)
Similarity:	208/619 - (33%)	Gaps:	174/619 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   126 MENVNRQQRPPSP-----KGIRRRTVGQPSSGLPQ--------QRVLGPSPQSRNVATPIAQRAN 177
            |.||..|....|.     |.:.:..|.|.:...|.        .::...:||:::. ..|.:...
Zfish    76 MANVEGQSDGSSNQIYKIKELEKMFVQQGNGTFPSLVEDNSEVTQMHSSNPQTKHF-YKIEESEG 139

  Fly   178 TQRGSTGNTMSRTSGGSNRSPYGDSSNVKQEPTSPF--EQLRKGYNNNKRPAQTS---------- 230
            ....|.|..:....||:|       .|..:...|.|  ||:....|.|.:....|
Zfish   140 GVASSGGRGLCTMEGGAN-------PNKAESLDSSFNREQIIVEVNLNNQTLNVSKGSDGKGVSS 197

  Fly   231 -LLSPPSKKPSLEEVKEFAEQQRMRKQIAAEYGDNDPEYDGGMLYDDVHAGDDDDD--------- 285
             |:......|..||.:|..|.:.:.:....||...:.|.:        :..||:||
Zfish   198 LLIHQHVSLPVTEEHRERDENEDVGEDEEEEYEHRNEEME--------NCSDDEDDEDEDEEENN 254

  Fly   286 -DMP------------PQPSTS-------------------KQQSPQGTQTQLEHGSTTIILKQD 318
             |:|            |:.:|:                   |:|...|.:.:||.       ||.
Zfish   255 LDIPDSGRSSQERLRAPRITTNTAMRQTLIDATLEEGRKRRKEQEGLGQKVKLEE-------KQH 312

  Fly   319 -SPSQTPTII-----VKDSSNAKLNHTKIIAEVLRQY---PHIVKGHKNIKLKIMPNTPAAPTEK 374
             |..:.|.:.     ::...|...|..:|..:..:::   ..::..|:            ...||
Zfish   313 FSCKKCPRVFNNRWYLEKHMNVTHNRMQICNKCGKRFLLESELLLHHQ------------TNCEK 365

  Fly   375 SAPATVKPPANQSSATTSPHKKLHVSFKADKSTPLITAQQK-----------AASSQQKSGTSQT 428
            :........|.:...:...|.|: |...|:|.......::|           .|.::....|.:|
Zfish   366 NIQCVTCGKAFKKLWSLHEHNKI-VHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCET 429

  Fly   429 TGNQGTGANPPANTAAAQKRRIDSKTMHALIAQGAENTTGPWLCLRCGVNGRPISIPSYR-GFRR 492
            .|.             :.||.:..| :|:|...|.:    |:.|..|....:      |: ..|.
Zfish   430 CGK-------------SFKRSMSLK-VHSLQHSGEK----PFKCENCSERFQ------YKYQLRS 470

  Fly   493 HL-INT-HKETIDPALCEHCGWRSVNNRELHFHMYMEHQTKSLLYTFAECALCNQSYRTKGELEA 555
            |: |:. ||:    .:|:.|| :..|.:: :|..:|:..|....|.   |.:|.:|:.::..::.
Zfish   471 HMSIHIGHKQ----FMCQWCG-KDFNMKQ-YFDEHMKTHTGEKPYI---CEICGKSFTSRPNMKR 526

  Fly   556 HINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALE--DGIIDETDEEFLGSQDEEEEAE 618
            | ...||.:....|..|.:.|.     :.:|...|||:..:  :.:..:|....||......:.:
Zfish   527 H-RRTHTGEKPYPCDVCGQRFR-----FSNMLKAHKEKCFQVSNPMASDTTTNLLGFDPASADMD 585

  Fly   619 GDEEQ-------EPEQTGKVRILSDISLPATSAI 645
            ....|       .|.:...:..:..:|||...:|
Zfish   586 TAANQIPSHPVTPPTEASSLHQVKPLSLPFIHSI 619

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.