DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and iws1

DIOPT Version :9

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_002664782.2 Gene:iws1 / 100329390 -ID:- Length:779 Species:Danio rerio


Alignment Length:646 Identity:132/646 - (20%)
Similarity:230/646 - (35%) Gaps:179/646 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 NEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDGIIDETDEEFLGSQDEEEEAE-GDE 621
            :|:|:||.....:                   ..||  ||........:..||.:|:.::: .|.
Zfish     5 DEIHSDDGSATPV-------------------QDEQ--EDAGPGSRQSDDDGSDNEDRKSDNSDS 48

  Fly   622 EQEPEQTGKVRILSDISLPA-----TSAITVQQAQQEQLQEE--------DVEQVQQEVKFVGAD 673
            |.||.:            ||     :|:...::|....|:||        |.|:.||:.:...:|
Zfish    49 EMEPPR------------PADSDDDSSSPVKRRASTSDLEEEEEKTHAASDSEEEQQKRRSPKSD 101

  Fly   674 -GNEVELTDEQRKEILSQLNQQQAGATAGGVVMVLSEPEAEHVKQETDEKSLAGTEEEYDDSQIY 737
             |::   :||.|.:..:|.:               ||.|.|...::...|:...::.|.|:.:..
Zfish   102 AGSD---SDEDRPKQRTQNH---------------SEDEEEEGGRKGKWKTAMNSDSEEDEDRAK 148

  Fly   738 SELGAADSVESAKKNIADESKE-----------SIDNLEWAENLIAESEEQSNKEPKS---DKPR 788
            .|.|:.:..:..|:.......|           |.|..|..:.....|::..::|||.   :...
Zfish   149 EEAGSDEDDKRPKRRALGSDDEDDGRPQRKALASDDEDERPKRKALGSDDDEDEEPKQKALNSDE 213

  Fly   789 DDISEKLKELTGDWTEDE-----------NDDDVDDKPATAELASELANKDPEPTVHEEEDDID- 841
            ||...|.|.|..|..:|:           :|||.|:.|....|.|:..:..|:....:.:||.| 
Zfish   214 DDKRPKRKALDSDDDDDDDDKRPKRKALGSDDDEDEGPKRKALGSDDDDGGPKSKALDSDDDEDE 278

  Fly   842 ------LALQSLHKGPEEAT-----EEKASEESVTSADDAVDAVPNINSQPEKMDVDSEAADEKA 895
                  ||.....:||:...     |::..:....::||..|..|...:.....|.|.:....|.
Zfish   279 RPKRKVLASDDEDEGPKRKALDSDDEDERPKRRALASDDEDDEGPKRKALGSDDDEDEDDKPVKR 343

  Fly   896 SKA---------EVQIKKEAELENDQEEFIKEDSPIPHSDSVAELREAVTASEGEDDVHLEADNI 951
            .||         |..:||...:.:|.:....|.|..|.....|:|:|..:.||.|:|       :
Zfish   344 KKAVLSDSDEDEEKAVKKSRIVSDDDDSGSDEGSGGPDKSLAAKLKELGSDSEDEED-------M 401

  Fly   952 RKELLDELIAEAEKPDQEKDIVQSEENATTEALDRSVTD---------EDDLV-----------P 996
            :|       .||.|.| ||.:..|:.::..:..::.:.|         |::..           |
Zfish   402 KK-------GEAGKKD-EKALFGSDSDSGGDEEEKMIADIFGESGDEEEEEFTGFNQEELEAERP 458

  Fly   997 PTQVSTEQ----------------------MEIDEPAAEKAAENNEDTRTADEKEAVEDKPNQTQ 1039
            .||||.::                      .:.|...|.|.|::.:..|..|....:.|    ..
Zfish   459 QTQVSGQRKADDDSDSDDGIDRGGKDMSYMSDFDMMLARKKAQSGKRRRNRDGGTFISD----AD 519

  Fly  1040 DVTTAEKPTLESAKAGDEATSGEAASVDK----VKSLISEWGDDDEDED--ENGVSAAAKE 1094
            ||.:|....:..|...|...:.:.....|    :.:::......|..|.  ::||.||.||
Zfish   520 DVVSAMITKMTEAAEEDRTLNSQKKPALKKLMLLPTVVMHLKKQDLKETFIDSGVMAAIKE 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB 20..122 CDD:279045
BTB 31..127 CDD:197585
C2H2 Zn finger 540..568 CDD:275371 4/9 (44%)
C2H2 Zn finger 569..586 CDD:275371 0/16 (0%)
iws1XP_002664782.2 CDC45 105..>180 CDD:280821 15/92 (16%)
TFIIS_I <490..728 CDD:294098 21/95 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588254
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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