DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynO and atp-3

DIOPT Version :9

Sequence 1:NP_524358.2 Gene:ATPsynO / 41845 FlyBaseID:FBgn0016691 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_001021421.1 Gene:atp-3 / 172195 WormBaseID:WBGene00000230 Length:228 Species:Caenorhabditis elegans


Alignment Length:203 Identity:94/203 - (46%)
Similarity:135/203 - (66%) Gaps:3/203 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLSRTLSSAAAQA---TVKPPVQVFGLEGRYATALYSAASKLSQLDQVEKDLTALQATIRSDKKL 70
            |:.|..|::||.|   .||.|:||.|:|||||.|||||..|.::|||:..||..:::..:.:||.
 Worm    25 LMKRGFSTSAALAKAQLVKTPIQVHGVEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKF 89

  Fly    71 REYVTSPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINAYKTIMAAHRGEV 135
            :|:|..|.:......||::..|.||.....|.|.|||||:||||.||::|::::::||.|||||:
 Worm    90 QEFVLDPTLKANKKKTAIEAISTKLGLTKETGNFLGLLAENGRLNKLESVVSSFESIMRAHRGEL 154

  Fly   136 VCEVVTAKPLDASQSKQLEGALKSFLKGNESLKITSRVDPSIIGGLIVSIGDKYVDMSIATKVKL 200
            ..:|.:|:.|.:|..|.|..||....|..:.|.:|..|.|||:|||:|:|||||||:|||::||.
 Worm   155 FVQVTSAEELSSSNQKALSDALSKIGKSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIASRVKK 219

  Fly   201 YTDVIQTA 208
            |.|.:.||
 Worm   220 YKDALATA 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynONP_524358.2 OSCP 32..199 CDD:278635 76/166 (46%)
atp-3NP_001021421.1 OSCP 51..224 CDD:278635 80/172 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167789
Domainoid 1 1.000 157 1.000 Domainoid score I2540
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1283
Inparanoid 1 1.050 181 1.000 Inparanoid score I2655
Isobase 1 0.950 - 0 Normalized mean entropy S1100
OMA 1 1.010 - - QHG57719
OrthoDB 1 1.010 - - D1178688at2759
OrthoFinder 1 1.000 - - FOG0004090
OrthoInspector 1 1.000 - - oto17477
orthoMCL 1 0.900 - - OOG6_101031
Panther 1 1.100 - - LDO PTHR11910
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R121
SonicParanoid 1 1.000 - - X3931
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

Return to query results.
Submit another query.