DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set and nap1l4b

DIOPT Version :9

Sequence 1:NP_650438.2 Gene:Set / 41844 FlyBaseID:FBgn0014879 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001007454.1 Gene:nap1l4b / 492812 ZFINID:ZDB-GENE-041114-168 Length:367 Species:Danio rerio


Alignment Length:353 Identity:84/353 - (23%)
Similarity:140/353 - (39%) Gaps:120/353 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVPKRAKLDGAPADGNTSAAAGNNEEESEALEQIDACQN-EIDA--LNEKASEEILKVEQKYN 62
            |.|:||..|                        .:::|.:| ::|:  :..|..:|:.::|:||:
Zfish    39 MDSLPKSVK------------------------RRVNALRNLQVDSTHIEAKFYKEVHELERKYS 79

  Fly    63 KLRKPCYEKRSELV---------------------------------------------KRIPNF 82
            .|.:|.::||.::|                                             |.||.|
Zfish    80 ALYQPLFDKRRKVVSGEVEPTDEECEWQSDHEDEAALAEDLKKKAAIEEKTEDANEEKPKGIPEF 144

  Fly    83 WVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSG------YRINFHFDENPYFENKVLT 141
            |:|.|.:...:|.:|.|.:|..|..|:.::|     |.||      :.:.|||:.|.||.|.|||
Zfish   145 WLTIFRSVDMLSDMLQEHDEPILKHLHDIKV-----IFSGPDQPMSFTLEFHFEPNEYFTNTVLT 204

  Fly   142 KEFHLNSAAASENGDWPASTSTP---------IKWKEGKNLLKLLLTKPYGNKKKRNSEYKT--- 194
            |.:.:.|   ..:.|.|.|...|         |.|::||::....:.|...:|.:..:...|   
Zfish   205 KVYKMKS---EPDADDPFSFEGPEIIDCEGCEIDWQKGKDVTVKTIKKKQKHKGRGTARVITKQV 266

  Fly   195 ----FFDWF--------------SDNTDPVNDEIAELIKDDLWPNPLQYYLVPDIEVEPEDEEDN 241
                ||::|              |:.|...:.||....::.:.|..:.|:....:|.:...||:.
Zfish   267 PNDSFFNFFNPIKVSPDKELDEDSEYTLATDFEIGHFFRERIVPRAVLYFTGEALEDDESFEEEE 331

  Fly   242 EDNDEEAFDDEDGEDGEGEEEEEDEDDK 269
            .|..||    ||.:|.|.|||||:.|.|
Zfish   332 LDEGEE----EDQDDEEEEEEEEEGDSK 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SetNP_650438.2 NAP 31..227 CDD:279323 62/279 (22%)
nap1l4bNP_001007454.1 V_Alix_like <19..134 CDD:187408 18/118 (15%)
NAP 48..318 CDD:279323 62/277 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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