DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Set and RGD1563307

DIOPT Version :9

Sequence 1:	NP_650438.2	Gene:	Set / 41844	FlyBaseID:	FBgn0014879	Length:	269	Species:	Drosophila melanogaster
Sequence 2:	XP_218493.2	Gene:	RGD1563307 / 308503	RGDID:	1563307	Length:	273	Species:	Rattus norvegicus

Alignment Length:	266	Identity:	145/266 - (54%)
Similarity:	195/266 - (73%)	Gaps:	15/266 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 AKLDGAPADGNTSAAAGNNE-EESEALEQIDACQNEIDALNEKASEEILKVEQKYNKLRKPCYEK 71
            ||......:.|...|...:| |:.||:|.|...|||||.|||:||||:||||||.||||:|.::|
  Rat     6 AKASKKELNSNHDGADKTSEKEQQEAIEHIGKVQNEIDRLNEQASEEVLKVEQKCNKLRQPFFQK 70

  Fly    72 RSELVKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYFE 136
            ||||:.::|.||||:||||||||..|.||:||.||.|.::||.|||||||||.|:|:||||||||
  Rat    71 RSELIAKVPKFWVTTFINHPQVSAFLAEEDEEALHYLTRVEVREFEDIKSGYGIDFYFDENPYFE 135

  Fly   137 NKVLTKEFHLNSAAASENGDWPASTSTPIKWKEGKNLLK-LLLTKPYGNKKKRNSEYKTFFDWFS 200
            ||||:||||||     |:|| |:|.||.||||.||:|.| ...|:....:|:::.|.::||.||:
  Rat   136 NKVLSKEFHLN-----ESGD-PSSKSTEIKWKSGKDLTKRSSQTQIKARRKRQHEEPESFFTWFT 194

  Fly   201 DNTDPVNDEIAELIKDDLWPNPLQYYLVPDIEVEPEDEEDNEDNDEEAFDDEDG-ED-GEGEEEE 263
            |::|...|::.|.||||:|||||||||.|::     |.|:.|.:|::.:|:|:| || .||:|:|
  Rat   195 DHSDADADDLGEAIKDDIWPNPLQYYLFPNM-----DNEEGEADDDDDYDEEEGLEDTDEGDEDE 254

  Fly   264 EDEDDK 269
            :|:|::
  Rat   255 DDDDEE 260

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Set	NP_650438.2	NAP	31..227	CDD:279323	121/196 (62%)
RGD1563307	XP_218493.2	NAP	37..221	CDD:279323	117/189 (62%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	197	1.000	Domainoid score	I3009
eggNOG	1	0.900	-	-		E1_KOG1508
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	309	1.000	Inparanoid score	I2531
OMA	1	1.010	-	-		QHG55441
OrthoDB	1	1.010	-	-		D1191764at2759
OrthoFinder	1	1.000	-	-		FOG0000644
OrthoInspector	1	1.000	-	-		otm46292
orthoMCL	1	0.900	-	-		OOG6_103113
Panther	1	1.100	-	-	O	PTHR11875
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2181
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	13	12.880