DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Set and spr-2

DIOPT Version :10

Sequence 1:NP_650438.2 Gene:Set / 41844 FlyBaseID:FBgn0014879 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001021333.1 Gene:spr-2 / 177704 WormBaseID:WBGene00005007 Length:313 Species:Caenorhabditis elegans


Alignment Length:297 Identity:122/297 - (41%)
Similarity:172/297 - (57%) Gaps:52/297 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVPKRAKLDGAPADGN-TSAAAGNNEEESEALEQIDACQNEIDALNEKASEEILKVEQKYNKL 64
            ||..|...::..|....| .|..||..:|:   |.::||.|:::|.::|.|:||:|||||.:|:.
 Worm     1 MSEEPAAKRMKNADEFPNLRSEVAGPVKEK---LIELDAIQHQLDVMSENAAEEVLKVEQIFNQK 62

  Fly    65 RKPCYEKRSELVKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHF 129
            |.|.||||.:|..:|.|||.|:|:||..:|..:.||:|:.|.||..|||:||||::||::|...|
 Worm    63 RLPIYEKRKKLTTKIDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTF 127

  Fly   130 DENPYFENKVLTKEFHLNSAAASENGDWPASTSTPIKWKEGKNLLKLLLTKPYGNKKKRNSEYKT 194
            |.|.||.|:|:||.:||.|.:       |::..|.|:|||.|.       .|:  |.:......|
 Worm   128 DPNEYFTNEVITKSYHLQSES-------PSTEITEIEWKENKK-------PPF--KPEDGDSAHT 176

  Fly   195 FFDWFSDNTDPVNDEIAELIKDDLWPNPLQYYLVPDI-EVEPEDEED--NE-------------- 242
            |.:|.:....|.:|||||:|||||:.||||||::||: |||.:|.||  ||              
 Worm   177 FLEWLTYAALPDSDEIAEVIKDDLYVNPLQYYVMPDMQEVEEDDIEDFLNEERGVDENGQRIPRR 241

  Fly   243 --------DNDEEAFDDEDGEDGEGEEEE---EDEDD 268
                    |.||.|    ||::||.||||   |:|:|
 Worm   242 NISDSLKVDQDESA----DGQEGEDEEEEDMGEEEED 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SetNP_650438.2 NAP 31..227 CDD:460010 87/195 (45%)
spr-2NP_001021333.1 NAP 67..>162 CDD:460010 48/101 (48%)

Return to query results.
Submit another query.