DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF2gamma and eefsec

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001032513.1 Gene:eefsec / 641497 ZFINID:ZDB-GENE-051120-72 Length:576 Species:Danio rerio


Alignment Length:483 Identity:111/483 - (22%)
Similarity:190/483 - (39%) Gaps:120/483 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NIGTIGHVAHGKSTVVKAISG-VQTVRF-KN--ELERNITIKLGYANAKIYKCDNPKCPRPASFV 102
            |:|.:|||..||:::.:|:|. ..|..| ||  ..||.||:.||::...:        |.|....
Zfish    11 NVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSKERGITLDLGFSAFTV--------PLPEHLR 67

  Fly   103 SDASSKD-DSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQ 166
            .....|. |||..|               .||||||..|:.|::.||.::|..:|::...:.. |
Zfish    68 ESCGEKQYDSLQFT---------------LVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGM-Q 116

  Fly   167 PQTSEHLAAIEIMKLKQILILQNKIDLIKESQAKEQYEEIT----KFVQGTVAEGAPIIPISAQ- 226
            .||:|.|...::...:.::|| ||.||:...:.:...:::|    |.::.|..:..|||.::|: 
Zfish   117 TQTAECLLIGQLTCSRMVVIL-NKTDLLPSDKRQAAIDKMTKRMHKTLENTRFKDCPIIAVAAKP 180

  Fly   227 ---------LKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGGVAGGSI 282
                     ....|..|.:.:..:..:|.||.:....:.|...|.:..        :|.|..|:|
Zfish   181 GGPEAPDTDEPQGITELIDLLKAQSFLPHRDPSGSLLMAVDHCFSIRG--------QGTVITGTI 237

  Fly   283 LSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGV-GTKIDPTL 346
            |.|.|.|...:|:....||:             ::.|:...:..:..|:.|..:|| .|:.||.|
Zfish   238 LQGSLSVNDNVEIPALKVTR-------------KVKSVQMFRKPVASAMQGDRVGVCVTQFDPKL 289

  Fly   347 CRADRLVGQVLGAVGQLPDIYQEL----EISYY------------------------LLRRLLGV 383
                 |...|:...|.|..:|..:    :|.||                        ...|:|..
Zfish   290 -----LERGVVCTPGSLQTLYAAIISVQKIEYYRGALNSRAKFHITVGHETVMARISFFNRVLPA 349

  Fly   384 RTDGDKKGARVEKLQKN-------EILLVNIGSLSTGGRISATKGDLAKI---VLTTPVCTEKGE 438
            ..:||.|....|:...:       ..|..::.|.:.||:....:..|.:.   |...|:|     
Zfish   350 NENGDSKPTSQEQSANSFSFDWEFHHLDEHLTSQAEGGKGEPQQWALLEFERPVTCPPLC----- 409

  Fly   439 KIALSRRVE-----NHWRLIGWGQIFGG 461
             :.:..|::     |..||...|::..|
Zfish   410 -LVIGSRLDSDIHGNTCRLAFHGKLLEG 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 111/483 (23%)
eefsecNP_001032513.1 SelB_euk 10..202 CDD:206676 58/215 (27%)
GTP_EFTU 11..201 CDD:278438 58/214 (27%)
SelB_II 216..298 CDD:293897 24/107 (22%)
eSelB_III 303..433 CDD:294009 23/135 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3276
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.