DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2gamma and Eefsec

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_006236926.1 Gene:Eefsec / 500255 RGDID:1560552 Length:583 Species:Rattus norvegicus


Alignment Length:358 Identity:95/358 - (26%)
Similarity:162/358 - (45%) Gaps:82/358 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RQATINIGTIGHVAHGKSTVVKAIS-GVQTVRFKNE---LERNITIKLGYANAKIYKCDNPKC-- 95
            |:..:|:|.:||:..||:.:.:|:| ...|..|..:   .||.||:.||::           |  
  Rat     4 RRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFS-----------CFV 57

  Fly    96 -PRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 159
             |.|.   ::..:.|..|               .|:.||||||..|:.|::.||.::|..:|:|.
  Rat    58 VPLPG---AEPGTSDTLL---------------QVTLVDCPGHASLIRTIIGGAQIIDLMMLVID 104

  Fly   160 GNESCPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAKEQYEEITKFVQGTVA----EGAPI 220
            ..:.. |.|::|.|...:|...|.:::| |||||:.|.:.:...:::||.:|.|:.    .||||
  Rat   105 VTKGM-QTQSAECLVIGQIACQKLVVVL-NKIDLLAEGKRQAAIDKMTKKMQKTLENTKFRGAPI 167

  Fly   221 IPISA----------QLKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKG 275
            ||::|          :....|..|.|.:.::|.:|.||.:.|..:.|...|.:..        :|
  Rat   168 IPVAAKPGGPEAPETEAPQGISELIELLKSQISIPTRDPSGPFLMSVDHCFSIKG--------QG 224

  Fly   276 GVAGGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGV-G 339
            .|..|:||||.:.:|..:|:....|.|             ::.|:......:..|:.|..:|: .
  Rat   225 TVMTGTILSGTISLGDSVEIPALKVVK-------------KVKSMQMFHTPVTSAMQGDRLGICV 276

  Fly   340 TKIDPTL------CRADRL--VGQVLGAVGQLP 364
            |:.||.|      |..:.|  |...|.:|.::|
  Rat   277 TQFDPKLLERGLVCAPESLHTVHAALISVEKIP 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 95/358 (27%)
EefsecXP_006236926.1 SelB_euk 8..197 CDD:206676 62/219 (28%)
SelB_II 210..292 CDD:293897 22/102 (22%)
eSelB_III 297..437 CDD:294009 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3276
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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