DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF2gamma and eif2s3

DIOPT Version :9

Sequence 1:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001011456.1 Gene:eif2s3 / 496946 XenbaseID:XB-GENE-986363 Length:472 Species:Xenopus tropicalis


Alignment Length:457 Identity:375/457 - (82%)
Similarity:407/457 - (89%) Gaps:0/457 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNIT 77
            :|.:|||:.|:||||||||||:|||||||||||||||||||||||||||||.|||||||||||||
 Frog    14 HLSRQDLATLNVSKLTPLSPEIISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNIT 78

  Fly    78 IKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMA 142
            |||||||||||:.|:|.|.||..:.|..||..|..|....|..|||:||||||||||||||||||
 Frog    79 IKLGYANAKIYQLDDPSCSRPECYRSCGSSTPDEFPTDIPNTKGNFKLVRHVSFVDCPGHDILMA 143

  Fly   143 TMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAKEQYEEIT 207
            ||||||||||||||||||||||||||||||||||||||||.||||||||||:||||||||||:|.
 Frog   144 TMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQIL 208

  Fly   208 KFVQGTVAEGAPIIPISAQLKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVAD 272
            .|||||||||||||||||||||||:|:|||||.|||||.|||.:.||||||||||||||||||.|
 Frog   209 AFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPLRDFISEPRLIVIRSFDVNKPGCEVDD 273

  Fly   273 LKGGVAGGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIG 337
            |||||||||||.||||||||||||||:|:|||:|.:.|:||||:|||||||.|:||||.||||||
 Frog   274 LKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIG 338

  Fly   338 VGTKIDPTLCRADRLVGQVLGAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQKNEI 402
            ||||||||||||||:|||||||||.||:|:.||||||:|||||||||.:||||.|:|:||.|||:
 Frog   339 VGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRIEGDKKAAKVQKLSKNEV 403

  Fly   403 LLVNIGSLSTGGRISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHWRLIGWGQIFGGKTITPV 467
            |:|||||||||||:||.|.||.|||||.|||||.|||||||||||.||||||||||..|.||.|.
 Frog   404 LMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPT 468

  Fly   468 LD 469
            :|
 Frog   469 VD 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 372/451 (82%)
eif2s3NP_001011456.1 PTZ00327 13..466 CDD:240362 372/451 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 341 1.000 Domainoid score I1086
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H90888
Inparanoid 1 1.050 744 1.000 Inparanoid score I583
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D268956at33208
OrthoFinder 1 1.000 - - FOG0002790
OrthoInspector 1 1.000 - - oto103575
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2155
SonicParanoid 1 1.000 - - X1879
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

Return to query results.
Submit another query.